RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 ELF5Q9UKW6 265 aaPredicted RBP12.16□□□□□ -0.46
TRAIP-201ENST00000331456 hCG_38984A0A1B0GV85 526 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 WIPF3A6NGB9 483 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 DISC1C4P0D8 188 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 NRASP01111 189 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 CD74P04233 296 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 MPGP29372 298 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 FOXG1P55316 489 aaPredicted RBP12.15□□□□□ -0.46
TRAIP-201ENST00000331456 RPS27AP62979 156 aaKnown RBP12.15□□□□□ -0.46
TRAIP-201ENST00000331456 FAM3AP98173 230 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 FBXW9Q5XUX1 488 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 LHFPL2Q6ZUX7 228 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 OR51T1Q8NGJ9 327 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 NANOS1Q8WY41 292 aaKnown RBP12.15□□□□□ -0.46
TRAIP-201ENST00000331456 SPSB4Q96A44 273 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 TECTBQ96PL2 329 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 NICN1Q9BSH3 213 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 ELL3Q9HB65 397 aaPredicted RBP12.15□□□□□ -0.46
TRAIP-201ENST00000331456 B3GNT2Q9NY97 397 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 PRSS50Q9UI38 385 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 SCP2D1Q9UJQ7 156 aa12.15□□□□□ -0.46
TRAIP-201ENST00000331456 AQP7O14520 342 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 CREBL2O60519 120 aaPredicted RBP12.15□□□□□ -0.47
TRAIP-201ENST00000331456 AMY2AP04746 511 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 RLN1P04808 185 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 SULT1A3P0DMM9 295 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 SULT1A4P0DMN0 295 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 HIST1H1DP16402 221 aaKnown RBP12.15□□□□□ -0.47
TRAIP-201ENST00000331456 SDHBP21912 280 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 RAD52P43351 418 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 OR3A2P47893 321 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 RAB1AP62820 205 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 ZNF92Q03936 586 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 OR8B8Q15620 311 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 DMRTC1Q5HYR2 192 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 ZBTB37Q5TC79 503 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 OR11H7Q8NGC8 314 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 BORCS8Q96FH0 119 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 NPDC1Q9NQX5 325 aaPredicted RBP12.15□□□□□ -0.47
TRAIP-201ENST00000331456 KCNN3Q9UGI6 736 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 SLC7A11Q9UPY5 501 aa12.15□□□□□ -0.47
TRAIP-201ENST00000331456 LOC100509620A0A075B734 347 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 A0A0A6YYD4 124 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 ZNF816-ZNF321PA0A0X1KG74 233 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 FAM230AA0A1W2PPH8 454 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 SNRPGP15A8MWD9 76 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 PYCARD-AS1I3L0S3 204 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 M0QYG6 137 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 SS18L1O75177 396 aaPredicted RBP12.14□□□□□ -0.47
TRAIP-201ENST00000331456 HPXP02790 462 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 TMEM225BP0DP42 221 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 EDN3P14138 238 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 MGMTP16455 207 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 ANXA7P20073 488 aaKnown RBP12.14□□□□□ -0.47
TRAIP-201ENST00000331456 SERPINA2P20848 420 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 CCNOP22674 350 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 GZMKP49863 264 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 RBP2P50120 134 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 MALLQ13021 153 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 ARL6IP1Q15041 203 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 RNASE10Q5GAN6 216 aaKnown RBP12.14□□□□□ -0.47
TRAIP-201ENST00000331456 TMEM42Q69YG0 159 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 CRIP3Q6Q6R5 217 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 COLCA1Q6ZS62 124 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 BPIFB2Q8N4F0 458 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 FAM89BQ8N5H3 189 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 OR1K1Q8NGR3 316 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 NUDCD2Q8WVJ2 157 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 SARAFQ96BY9 339 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 SLC25A21Q9BQT8 299 aaPredicted RBP12.14□□□□□ -0.47
TRAIP-201ENST00000331456 METTL9Q9H1A3 318 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 PLEKHA6Q9Y2H5 1048 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 PIEZO1Q92508 2521 aa12.14□□□□□ -0.47
TRAIP-201ENST00000331456 ZNF407Q9C0G0 2248 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 UBE2QL1A1L167 161 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 C5orf49A4QMS7 147 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 SOCS1O15524 211 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 TBPP20226 339 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 CPT2P23786 658 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 CBX5P45973 191 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 ATP1B3P54709 279 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 TNK1Q13470 666 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 C1QL2Q7Z5L3 287 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 APOBEC3DQ96AK3 386 aaPredicted RBP12.13□□□□□ -0.47
TRAIP-201ENST00000331456 HYLS1Q96M11 299 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 SEC22CQ9BRL7 303 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 TINAGL1Q9GZM7 467 aaPredicted RBP12.13□□□□□ -0.47
TRAIP-201ENST00000331456 CLCF1Q9UBD9 225 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 ZNF69Q9UC07 566 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 MEIKINA0A087WXM9 373 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 A0A1W2PP11 408 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 PROB1E7EW31 1015 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 SERPINA5P05154 406 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 FUT6P51993 359 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 ZMYND11Q15326 602 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 IDO2Q6ZQW0 420 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
TRAIP-201ENST00000331456 CCDC107Q8WV48 283 aa12.13□□□□□ -0.47
TRAIP-201ENST00000331456 TRIB1Q96RU8 372 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms