RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SUPT4H1P63272 117 aaKnown RBP13.52□□□□□ -0.24
BRCC3-201ENST00000330045 PABPC1L2AQ5JQF8 200 aa13.52□□□□□ -0.24
BRCC3-201ENST00000330045 NKAPLQ5M9Q1 402 aa13.52□□□□□ -0.24
BRCC3-201ENST00000330045 GUSBP11Q6P575 273 aa13.52□□□□□ -0.24
BRCC3-201ENST00000330045 PNLDC1Q8NA58 520 aaKnown RBP13.52□□□□□ -0.24
BRCC3-201ENST00000330045 OR5T2Q8NGG2 359 aa13.52□□□□□ -0.24
BRCC3-201ENST00000330045 OR13G1Q8NGZ3 307 aa13.52□□□□□ -0.24
BRCC3-201ENST00000330045 SLC22A8Q8TCC7 542 aa13.52□□□□□ -0.24
BRCC3-201ENST00000330045 MICU1Q9BPX6 476 aa13.52□□□□□ -0.24
BRCC3-201ENST00000330045 E9PLN8 166 aa13.52□□□□□ -0.25
BRCC3-201ENST00000330045 CD79AP11912 226 aa13.52□□□□□ -0.25
BRCC3-201ENST00000330045 KLK2P20151 261 aa13.52□□□□□ -0.25
BRCC3-201ENST00000330045 ANKRD55Q3KP44 614 aa13.52□□□□□ -0.25
BRCC3-201ENST00000330045 PRSS54Q6PEW0 395 aa13.52□□□□□ -0.25
BRCC3-201ENST00000330045 LHFPL1Q86WI0 220 aa13.52□□□□□ -0.25
BRCC3-201ENST00000330045 FAM89BQ8N5H3 189 aa13.52□□□□□ -0.25
BRCC3-201ENST00000330045 OR5D18Q8NGL1 313 aa13.52□□□□□ -0.25
BRCC3-201ENST00000330045 TMED6Q8WW62 240 aa13.52□□□□□ -0.25
BRCC3-201ENST00000330045 SMOC1Q9H4F8 434 aa13.52□□□□□ -0.25
BRCC3-201ENST00000330045 PURGQ9UJV8 347 aaKnown RBP13.52□□□□□ -0.25
BRCC3-201ENST00000330045 PILRBQ9UKJ0 227 aa13.52□□□□□ -0.25
BRCC3-201ENST00000330045 ASCC3Q8N3C0 2202 aaKnown RBP13.51□□□□□ -0.25
BRCC3-201ENST00000330045 LY6G6EA0A0G2JKS1 128 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 AQP7P3A6NL99 342 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 SDCBPO00560 298 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-201ENST00000330045 TLX3O43711 291 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-201ENST00000330045 PTGFRP43088 359 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 CSNK2A1P68400 391 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-201ENST00000330045 ECH1Q13011 328 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 KISS1Q15726 138 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 HLA-BQ31612 363 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 AADACL3Q5VUY0 350 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 SVBPQ8N300 66 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 CSNK2A3Q8NEV1 391 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 SLC25A43Q8WUT9 341 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-201ENST00000330045 ARL11Q969Q4 196 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 PGAM5Q96HS1 289 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 CRB3Q9BUF7 120 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 METTL8Q9H825 291 aaKnown RBP13.51□□□□□ -0.25
BRCC3-201ENST00000330045 OR5AC2Q9NZP5 309 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 HDGFL3Q9Y3E1 203 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 U3KQA8 63 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 MSGN1A6NI15 193 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 GPR31O00270 319 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 HTR3BO95264 441 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 ACTL6AO96019 429 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 CFIP05156 583 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 LYL1P12980 280 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 PRF1P14222 555 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 EPHA8P29322 1005 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-201ENST00000330045 SNU13P55769 128 aaKnown RBP13.51□□□□□ -0.25
BRCC3-201ENST00000330045 ZNF239Q16600 458 aaKnown RBP13.51□□□□□ -0.25
BRCC3-201ENST00000330045 C1QL2Q7Z5L3 287 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 WDSUB1Q8N9V3 476 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 GHRLQ9UBU3 117 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 OSGIN2Q9Y236 505 aa13.51□□□□□ -0.25
BRCC3-201ENST00000330045 C5orf63A6NC05 138 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 LAMTOR5O43504 91 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 GLRA1P23415 457 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 CLDN17P56750 224 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 TAS2R46P59540 309 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 ZNF585AQ6P3V2 769 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 PUSL1Q8N0Z8 303 aaKnown RBP13.5□□□□□ -0.25
BRCC3-201ENST00000330045 BHLHE23Q8NDY6 225 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 NPRL2Q8WTW4 380 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 SPACA9Q96E40 222 aaPredicted RBP13.5□□□□□ -0.25
BRCC3-201ENST00000330045 LIN37Q96GY3 246 aaPredicted RBP13.5□□□□□ -0.25
BRCC3-201ENST00000330045 OR10C1Q96KK4 312 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 LYZL4Q96KX0 146 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 RASL10BQ96S79 203 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 SPSB2Q99619 263 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.5□□□□□ -0.25
BRCC3-201ENST00000330045 EHFQ9NZC4 300 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 RARRES3Q9UL19 164 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 LOC102725191A0A1B0GVB3 256 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 SIGLEC6O43699 453 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 ADCYAP1P18509 176 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 CTSSP25774 331 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 ADH6P28332 368 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 BLVRBP30043 206 aaPredicted RBP13.5□□□□□ -0.25
BRCC3-201ENST00000330045 EIF1P41567 113 aaKnown RBP13.5□□□□□ -0.25
BRCC3-201ENST00000330045 GUCA1AP43080 201 aaPredicted RBP13.5□□□□□ -0.25
BRCC3-201ENST00000330045 TMEM105Q8N8V8 129 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 C2orf50Q96LR7 162 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 DEFB126Q9BYW3 111 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 ZNF160Q9HCG1 818 aa13.5□□□□□ -0.25
BRCC3-201ENST00000330045 ZNF629Q9UEG4 869 aaPredicted RBP13.5□□□□□ -0.25
BRCC3-201ENST00000330045 TNRC6BQ9UPQ9 1833 aaKnown RBP13.5□□□□□ -0.25
BRCC3-201ENST00000330045 CELSR3Q9NYQ7 3312 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 NUDT19A8MXV4 375 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 STMND1H3BQB6 276 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 FKBP2P26885 142 aaKnown RBP13.49□□□□□ -0.25
BRCC3-201ENST00000330045 ALDH3B1P43353 468 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 LSM6P62312 80 aaKnown RBP13.49□□□□□ -0.25
BRCC3-201ENST00000330045 SLC35A1P78382 337 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 EIF3IQ13347 325 aaKnown RBP13.49□□□□□ -0.25
BRCC3-201ENST00000330045 CRIP3Q6Q6R5 217 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 WDR5BQ86VZ2 330 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 ESX1Q8N693 406 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 FADS6Q8N9I5 356 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms