RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 IFNA5P01569 189 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 GALP22466 123 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 F2RL1P55085 397 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 MLF1P58340 268 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 AWAT1Q58HT5 328 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 Q7L0L9 218 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 LRP11Q86VZ4 500 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 OR5M8Q8NGP6 311 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 RHOVQ96L33 236 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 LAT2Q9GZY6 243 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 TXNIPQ9H3M7 391 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 CALHM2Q9HA72 323 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 MPDZO75970 2070 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 EFEMP2O95967 443 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 WNT11O96014 354 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 FAHP16930 419 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 GPR3P46089 330 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 MFAP5Q13361 173 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 SP6Q3SY56 376 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 C4orf45Q96LM5 186 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 FAM166BA8MTA8 275 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 DNASE2O00115 360 aaPredicted RBP13.63□□□□□ -0.23
VARS2-201ENST00000321897 SRFP11831 508 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 FOLR3P41439 243 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 ID4P47928 161 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 RAB11AP62491 216 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 SKP2Q13309 424 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 SLC22A25Q6T423 547 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 ZNF705AQ6ZN79 300 aaPredicted RBP13.63□□□□□ -0.23
VARS2-201ENST00000321897 MOB3CQ70IA8 216 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 UBALD1Q8TB05 177 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 APOBEC4Q8WW27 367 aaKnown RBP13.63□□□□□ -0.23
VARS2-201ENST00000321897 ZNF724A8MTY0 619 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 B2MP61769 119 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 SLC25A30Q5SVS4 291 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 PTPMT1Q8WUK0 201 aaPredicted RBP13.62□□□□□ -0.23
VARS2-201ENST00000321897 OR8B4Q96RC9 309 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 NIPSNAP3BQ9BS92 247 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 PAPOLGQ9BWT3 736 aaKnown RBP13.62□□□□□ -0.23
VARS2-201ENST00000321897 TIMM8BQ9Y5J9 83 aaPredicted RBP13.62□□□□□ -0.23
VARS2-201ENST00000321897 COL6A6A6NMZ7 2263 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 HPP00738 406 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 CX3CR1P49238 355 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 MYBPHQ13203 477 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 OR2T2Q6IF00 324 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 NAA11Q9BSU3 229 aaPredicted RBP13.62□□□□□ -0.23
VARS2-201ENST00000321897 MRPS18AQ9NVS2 196 aaKnown RBP13.62□□□□□ -0.23
VARS2-201ENST00000321897 BLACEA4D250 179 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 SLC17A2O00624 439 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 ARPC3O15145 178 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 DUSP1P28562 367 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 CCL7P80098 99 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 MFGE8Q08431 387 aaPredicted RBP13.62□□□□□ -0.23
VARS2-201ENST00000321897 ZNF239Q16600 458 aaKnown RBP13.62□□□□□ -0.23
VARS2-201ENST00000321897 ANKRD16Q6P6B7 361 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 UQCC3Q6UW78 93 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 C5orf46Q6UWT4 87 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 ETV3LQ6ZN32 361 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 TMPPEQ6ZT21 453 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 SLC16A14Q7RTX9 510 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 SLC22A24Q8N4F4 322 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 ZFP62Q8NB50 900 aaPredicted RBP13.62□□□□□ -0.23
VARS2-201ENST00000321897 AGBL5Q8NDL9 886 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 OR5L1Q8NGL2 311 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 EDAQ92838 391 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 SPSB2Q99619 263 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 CFHR5Q9BXR6 569 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 PIGLQ9Y2B2 252 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 R4GN57 208 aa13.62□□□□□ -0.23
VARS2-201ENST00000321897 TMEM272A0A1B0GTI8 110 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 GSTZ1O43708 216 aaPredicted RBP13.61□□□□□ -0.23
VARS2-201ENST00000321897 NR2C1P13056 603 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 RPS18P62269 152 aaKnown RBP13.61□□□□□ -0.23
VARS2-201ENST00000321897 PLP2Q04941 152 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 PLCXD3Q63HM9 321 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 CYB5R2Q6BCY4 276 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 RPS19BP1Q86WX3 136 aaKnown RBP13.61□□□□□ -0.23
VARS2-201ENST00000321897 OR1N1Q8NGS0 311 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 OR2AE1Q8NHA4 323 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 SGK3Q96BR1 496 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 PGLYRP3Q96LB9 341 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 SLCO5A1Q9H2Y9 848 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 ABI3Q9P2A4 366 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 NXT1Q9UKK6 140 aaKnown RBP13.61□□□□□ -0.23
VARS2-201ENST00000321897 ADAM10O14672 748 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 YKT6O15498 198 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 MSX1P28360 303 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 SLC37A1P57057 533 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 ABHD17BQ5VST6 288 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 RPUSD3Q6P087 351 aaKnown RBP13.61□□□□□ -0.23
VARS2-201ENST00000321897 AAED1Q7RTV5 226 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 OR52N4Q8NGI2 321 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 ROBO4Q8WZ75 1007 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 SPTSSAQ969W0 71 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 MMP26Q9NRE1 261 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 PIPOXQ9P0Z9 390 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 PRRC2CQ9Y520 2896 aaKnown RBP13.61□□□□□ -0.23
VARS2-201ENST00000321897 PRUNE2Q8WUY3 3088 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 EIF4E2O60573 245 aaKnown RBP13.61□□□□□ -0.23
VARS2-201ENST00000321897 GLB1P16278 677 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms