RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ZNRF4Q8WWF5 429 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 SPSB4Q96A44 273 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 COPS4Q9BT78 406 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 OPA3Q9H6K4 179 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 CNTD2Q9H8S5 307 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 RPUSD1Q9UJJ7 312 aaKnown RBP11.72□□□□□ -0.53
RPP40-201ENST00000319533 SLC22A31A6NKX4 558 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 FAM183AA6NL82 134 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 PRR23D1E9PI22 279 aaPredicted RBP11.71□□□□□ -0.53
RPP40-201ENST00000319533 ZNF593O00488 134 aaPredicted RBP11.71□□□□□ -0.53
RPP40-201ENST00000319533 PRR23D2P0DMB1 279 aaPredicted RBP11.71□□□□□ -0.53
RPP40-201ENST00000319533 PSKH1P11801 424 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 GSTT1P30711 240 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 DDOSTP39656 456 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 SLC34A1Q06495 639 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 ATP6AP1Q15904 470 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 TEX30Q5JUR7 227 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 LYPD4Q6UWN0 246 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 GDPGP1Q6ZNW5 385 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 Q6ZSV7 163 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 ERI1Q8IV48 349 aaKnown RBP11.71□□□□□ -0.53
RPP40-201ENST00000319533 C11orf53Q8IXP5 236 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 ZNF511Q8NB15 262 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 NPRL2Q8WTW4 380 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 INTS14Q96SY0 518 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 OR51V1Q9H2C8 321 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 SEMA6AQ9H2E6 1030 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 DPAGT1Q9H3H5 408 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 MED20Q9H944 212 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 C14orf119Q9NWQ9 140 aa11.71□□□□□ -0.53
RPP40-201ENST00000319533 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.7□□□□□ -0.54
RPP40-201ENST00000319533 A0A1B0GVI7 797 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 ZNF878C9JN71 531 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 G3V2T6 193 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 TSPAN9O75954 239 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 GLCEO94923 617 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 GRPP07492 148 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 MUC1P15941 1255 aaPredicted RBP11.7□□□□□ -0.54
RPP40-201ENST00000319533 PEX2P28328 305 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 SLC15A1P46059 708 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 CDK5Q00535 292 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 EIF2B1Q14232 305 aaKnown RBP11.7□□□□□ -0.54
RPP40-201ENST00000319533 SNCBQ16143 134 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 KLHL12Q53G59 568 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 LPCAT4Q643R3 524 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 PLBD1Q6P4A8 553 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 FAHD1Q6P587 224 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 VMO1Q7Z5L0 202 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 WDR86Q86TI4 376 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 ZDHHC13Q8IUH4 622 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 SCCPDHQ8NBX0 429 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 OR56B2PQ8NGI1 322 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 OR6N2Q8NGY6 317 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 UBE2FQ969M7 185 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 SLAMF6Q96DU3 332 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 KCNJ15Q99712 375 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 PRRG3Q9BZD7 231 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 SLC25A19Q9HC21 320 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 CENPMQ9NSP4 180 aa11.7□□□□□ -0.54
RPP40-201ENST00000319533 A6NLC8 198 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.69□□□□□ -0.54
RPP40-201ENST00000319533 CASQ2O14958 399 aaPredicted RBP11.69□□□□□ -0.54
RPP40-201ENST00000319533 PRODHO43272 600 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 XRCC2O43543 280 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 CRISP1P54107 249 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 RPS7P62081 194 aaKnown RBP11.69□□□□□ -0.54
RPP40-201ENST00000319533 ESRRGP62508 458 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 GRB2P62993 217 aaKnown RBP11.69□□□□□ -0.54
RPP40-201ENST00000319533 SNAPC1Q16533 368 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 LINC01590Q5TEZ4 76 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 SHFQ7M4L6 423 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 ST8SIA4Q92187 359 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 C12orf43Q96C57 262 aaKnown RBP11.69□□□□□ -0.54
RPP40-201ENST00000319533 TCF7L1Q9HCS4 588 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 KRT84Q9NSB2 600 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 TVP23BQ9NYZ1 205 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 ZNRD1Q9P1U0 126 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 ENOPH1Q9UHY7 261 aa11.69□□□□□ -0.54
RPP40-201ENST00000319533 IGHV3OR15-7A0A075B7D8 119 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 A0A1B0GW55 424 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 SAC3D1A6NKF1 404 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 TSPAN15O95858 294 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 FBP1P09467 338 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 DUX4L2P0CJ85 424 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 DUX4L3P0CJ86 424 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 DUX4L4P0CJ87 422 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 DUX4L5P0CJ88 424 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 DUX4L6P0CJ89 424 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 DUX4L7P0CJ90 424 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 HSD11B1P28845 292 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 TGM4P49221 684 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 DAPP51397 102 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 PRKXP51817 358 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 FAM3AP98173 230 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 GUCA2AQ02747 115 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 POU4F2Q12837 409 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 MICBQ29980 383 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 WDR38Q5JTN6 314 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 SLC35D3Q5M8T2 416 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 ATPAF1Q5TC12 328 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms