RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 MST1LQ2TV78 715 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 DEFB133Q30KQ1 61 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 OR2B11Q5JQS5 317 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 PLAC9Q5JTB6 97 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 UQCC3Q6UW78 93 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 MYPOPQ86VE0 399 aaPredicted RBP12.6□□□□□ -0.39
PABPC1-201ENST00000318607 TMEM123Q8N131 208 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 SMIM10Q96HG1 83 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 UTP23Q9BRU9 249 aaKnown RBP12.6□□□□□ -0.39
PABPC1-201ENST00000318607 FOXS1O43638 330 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 SLC25A1P53007 311 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 Q3ZCU0 254 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 CNTNAP3Q9BZ76 1288 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 ZNF275Q9NSD4 429 aaPredicted RBP12.6□□□□□ -0.39
PABPC1-201ENST00000318607 PLEKHJ1Q9NW61 149 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 ZNF581Q9P0T4 197 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 WIF1Q9Y5W5 379 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 PLXNA2O75051 1894 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 TCRBV21S2A2A0A5A6 115 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 YKT6O15498 198 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 CST7O76096 145 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 IFNA21P01568 189 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 ACKR3P25106 362 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 GLP1RP43220 463 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 SOHLH1Q5JUK2 328 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 LPCAT3Q6P1A2 487 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 LINC00114Q6XXX2 140 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 SULF2Q8IWU5 870 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 C11orf40Q8WZ69 217 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 THOC3Q96J01 351 aaKnown RBP12.6□□□□□ -0.39
PABPC1-201ENST00000318607 PBOV1Q9GZY1 135 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 ALX4Q9H161 411 aaPredicted RBP12.6□□□□□ -0.39
PABPC1-201ENST00000318607 KLHL13Q9P2N7 655 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 WNT16Q9UBV4 365 aa12.6□□□□□ -0.39
PABPC1-201ENST00000318607 SPTBN2O15020 2390 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 MEGF11A6BM72 1044 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 EIF1BO60739 113 aaKnown RBP12.59□□□□□ -0.39
PABPC1-201ENST00000318607 FAM157CP0CG43 387 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 SLC25A4P12235 298 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 RAB5AP20339 215 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 EIF1P41567 113 aaKnown RBP12.59□□□□□ -0.39
PABPC1-201ENST00000318607 SULT1A1P50225 295 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 ZNF345Q14585 488 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 ZNF141Q15928 474 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 ZNF813Q6ZN06 617 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 SLC22A24Q8N4F4 322 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 C19orf47Q8N9M1 422 aaKnown RBP12.59□□□□□ -0.39
PABPC1-201ENST00000318607 CRLF2Q9HC73 371 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 R4GMQ9 66 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 ZNF705GA8MUZ8 300 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-201ENST00000318607 NUDT21O43809 227 aaKnown RBP12.59□□□□□ -0.39
PABPC1-201ENST00000318607 IFNA4P05014 189 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 THEGLP0DJG4 465 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 FAHP16930 419 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 ZNF84P51523 738 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 CYCSP99999 105 aaKnown RBP12.59□□□□□ -0.39
PABPC1-201ENST00000318607 CATSPERDQ86XM0 798 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 ZNF440Q8IYI8 595 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 NECAP1Q8NC96 275 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 STT3BQ8TCJ2 826 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 LMX1AQ8TE12 382 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 EDARADDQ8WWZ3 215 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 PHYHIPLQ96FC7 376 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 SUSD2Q9UGT4 822 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 PADI1Q9ULC6 663 aa12.59□□□□□ -0.39
PABPC1-201ENST00000318607 TRAV36DV7A0A075B6V5 113 aa12.58□□□□□ -0.39
PABPC1-201ENST00000318607 FCGR2AP12318 317 aa12.58□□□□□ -0.39
PABPC1-201ENST00000318607 TSC22D1Q15714 1073 aa12.58□□□□□ -0.39
PABPC1-201ENST00000318607 TMEM244Q5VVB8 128 aa12.58□□□□□ -0.39
PABPC1-201ENST00000318607 STX12Q86Y82 276 aa12.58□□□□□ -0.39
PABPC1-201ENST00000318607 TMEM106CQ9BVX2 250 aa12.58□□□□□ -0.39
PABPC1-201ENST00000318607 WBP1LQ9NX94 342 aa12.58□□□□□ -0.39
PABPC1-201ENST00000318607 KLRF1Q9NZS2 232 aa12.58□□□□□ -0.39
PABPC1-201ENST00000318607 TNFP01375 233 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 FABP4P15090 132 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 TAGLN2P37802 199 aaKnown RBP12.58□□□□□ -0.4
PABPC1-201ENST00000318607 ZNF561Q8N587 486 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 FLVCR1-AS1Q8TAF5 88 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 ASB17Q8WXJ9 295 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 GPR61Q9BZJ8 451 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 TOLLIPQ9H0E2 274 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 IGKV1D-8A0A087WSZ0 117 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 IGHV3-15A0A0B4J1V0 119 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 SPRY1O43609 319 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-201ENST00000318607 RAMP1O60894 148 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 CD37P11049 281 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 HNRNPA2B1P22626 353 aaKnown RBP12.58□□□□□ -0.4
PABPC1-201ENST00000318607 NUBP1P53384 320 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 CLRN1P58418 232 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 SSX9Q7RTT3 188 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 SUMF2Q8NBJ7 301 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 OR13G1Q8NGZ3 307 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 TMEM230Q96A57 120 aa12.58□□□□□ -0.4
PABPC1-201ENST00000318607 LINC01565O15544 149 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 HNRNPA1P09651 372 aaKnown RBP eCLIP12.57□□□□□ -0.4
PABPC1-201ENST00000318607 PGCP20142 388 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 EPHA1P21709 976 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 P2RY4P51582 365 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 RPUSD3Q6P087 351 aaKnown RBP12.57□□□□□ -0.4
PABPC1-201ENST00000318607 LYZL2Q7Z4W2 148 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms