RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 TMEM50BP56557 158 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 QRFPP83859 136 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 NHLH1Q02575 133 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 ZNF239Q16600 458 aaKnown RBP8.55□□□□□ -1.04
PTPRA-202ENST00000318266 FNDC7Q5VTL7 733 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 AADACL3Q5VUY0 350 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 ZNF776Q68DI1 518 aaPredicted RBP8.55□□□□□ -1.04
PTPRA-202ENST00000318266 RPUSD3Q6P087 351 aaKnown RBP8.55□□□□□ -1.04
PTPRA-202ENST00000318266 LYPD6Q86Y78 171 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 OR1J1Q8NGS3 322 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 ZNF519Q8TB69 540 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 FAM213BQ8TBF2 198 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 MRPL24Q96A35 216 aaKnown RBP8.55□□□□□ -1.04
PTPRA-202ENST00000318266 REEP6Q96HR9 211 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 TAAR9Q96RI9 348 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 NUDT22Q9BRQ3 303 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 TMEM59Q9BXS4 323 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 TXNIPQ9H3M7 391 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 ELL3Q9HB65 397 aaPredicted RBP8.55□□□□□ -1.04
PTPRA-202ENST00000318266 TREM2Q9NZC2 230 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 DOK5Q9P104 306 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 MEMO1Q9Y316 297 aa8.55□□□□□ -1.04
PTPRA-202ENST00000318266 LINC01553A4QN01 128 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 BPNT1O95861 308 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 IGFBP4P22692 258 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 ANOS1P23352 680 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 MPZP25189 248 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 PTGER4P35408 488 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 ZNF84P51523 738 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 RAP1AP62834 184 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTPRA-202ENST00000318266 SPNS3Q6ZMD2 512 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 ABHD12BQ7Z5M8 362 aaPredicted RBP8.54□□□□□ -1.04
PTPRA-202ENST00000318266 OR56B1Q8NGI3 324 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 FNDC9Q8TBE3 224 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 MR1Q95460 341 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 PTX4Q96A99 478 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 WDR92Q96MX6 357 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 GAR1Q9NY12 217 aaKnown RBP8.54□□□□□ -1.04
PTPRA-202ENST00000318266 DNAJB11Q9UBS4 358 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 STARD10Q9Y365 291 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 TMEM184BQ9Y519 407 aaPredicted RBP8.54□□□□□ -1.04
PTPRA-202ENST00000318266 CLDN16Q9Y5I7 305 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 TRIOO75962 3097 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 TAAR5O14804 337 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 SRSF10O75494 262 aaKnown RBP8.54□□□□□ -1.04
PTPRA-202ENST00000318266 KLK2P20151 261 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 FPR2P25090 351 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 RUNX3Q13761 415 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 SGCBQ16585 318 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 C1orf140Q5VVS0 124 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 TMEM182Q6ZP80 229 aaPredicted RBP8.54□□□□□ -1.04
PTPRA-202ENST00000318266 ARRDC1Q8N5I2 433 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 CCDC54Q8NEL0 328 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 OR5D14Q8NGL3 314 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTPRA-202ENST00000318266 POLR1DQ9Y2S0 133 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 KMT2EQ8IZD2 1858 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 OPN1LWP04000 364 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 LYL1P12980 280 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 HSD11B1P28845 292 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 GABRA4P48169 554 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 ACY1Q03154 408 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 HMGN3Q15651 99 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 C4orf17Q53FE4 359 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 SOHLH1Q5JUK2 328 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 TSPO2Q5TGU0 170 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 KLHL24Q6TFL4 600 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 TMEM156Q8N614 296 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 SLC37A2Q8TED4 501 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 TOMM40LQ969M1 308 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 SGK3Q96BR1 496 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 C14orf144Q96I85 54 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 GPR61Q9BZJ8 451 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 TBL1XR1Q9BZK7 514 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 PBOV1Q9GZY1 135 aa8.54□□□□□ -1.04
PTPRA-202ENST00000318266 TMED7-TICAM2A0A0A6YYA0 188 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 SLC33A1O00400 549 aaPredicted RBP8.53□□□□□ -1.04
PTPRA-202ENST00000318266 CDC14BO60729 498 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 GP1BBP13224 206 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 RPS2P15880 293 aaKnown RBP8.53□□□□□ -1.04
PTPRA-202ENST00000318266 TBPP20226 339 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 IL12BP29460 328 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 POU3F1Q03052 451 aaPredicted RBP8.53□□□□□ -1.04
PTPRA-202ENST00000318266 FUT7Q11130 342 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 GAMTQ14353 236 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 NFATC4Q14934 902 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 ARMC6Q6NXE6 501 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 PLXDC2Q6UX71 529 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 OR51T1Q8NGJ9 327 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 GNRHR2Q96P88 292 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 SUCNR1Q9BXA5 334 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 UBE2ZQ9H832 354 aaPredicted RBP8.53□□□□□ -1.04
PTPRA-202ENST00000318266 WFDC1Q9HC57 220 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 C19orf12Q9NSK7 152 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 UFSP2Q9NUQ7 469 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 LUZP4Q9P127 313 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 C14orf166Q9Y224 244 aaKnown RBP8.53□□□□□ -1.04
PTPRA-202ENST00000318266 B3GALT5Q9Y2C3 310 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 TDRD6O60522 2096 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms