RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 DHODHQ02127 395 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 TCF15Q12870 199 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 PLEKHN1Q494U1 663 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-202ENST00000315962 CLVS2Q5SYC1 327 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 PDSS1Q5T2R2 415 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 ATPAF1Q5TC12 328 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-202ENST00000315962 FAM57BQ71RH2 274 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-202ENST00000315962 LINC00518Q8N0U6 118 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 CLRN3Q8NCR9 226 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 NOXO1Q8NFA2 376 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 RAB40AQ8WXH6 277 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 LIN37Q96GY3 246 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-202ENST00000315962 CDC6Q99741 560 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 CMSS1Q9BQ75 279 aaKnown RBP6.69□□□□□ -1.34
TRIM55-202ENST00000315962 DDA1Q9BW61 102 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 SH2D2AQ9NP31 389 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 MLXQ9UH92 298 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 SHPKQ9UHJ6 478 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 TPRP12270 2363 aaKnown RBP6.69□□□□□ -1.34
TRIM55-202ENST00000315962 KANTRA0A1W2PQU2 76 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 SNRPGP15A8MWD9 76 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 CCNOP22674 350 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 CD34P28906 385 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 FAUP35544 74 aaKnown RBP6.69□□□□□ -1.34
TRIM55-202ENST00000315962 GUCA1AP43080 201 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-202ENST00000315962 CAPZA2P47755 286 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 PLGLB1Q02325 96 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 FOXO1Q12778 655 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 CDNFQ49AH0 187 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 SLC25A53Q5H9E4 307 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 THEM4Q5T1C6 240 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 BATF2Q8N1L9 274 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 BPIFB2Q8N4F0 458 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 ZIC4Q8N9L1 334 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 ADAD2Q8NCV1 583 aaKnown RBP6.69□□□□□ -1.34
TRIM55-202ENST00000315962 OR9K2Q8NGE7 335 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 OR13C9Q8NGT0 318 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 FNDC9Q8TBE3 224 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 ADAT3Q96EY9 351 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-202ENST00000315962 UTP23Q9BRU9 249 aaKnown RBP6.69□□□□□ -1.34
TRIM55-202ENST00000315962 C1orf198Q9H425 327 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 SCPEP1Q9HB40 452 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 G6PC2Q9NQR9 355 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 LUZP4Q9P127 313 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 MBD2Q9UBB5 411 aa6.69□□□□□ -1.34
TRIM55-202ENST00000315962 OR2AT4A6NND4 320 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 SULT1C2O00338 296 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 CD63P08962 238 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 CBX5P45973 191 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 ID4P47928 161 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 KCNJ3P48549 501 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 CSNK1A1P48729 337 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 FOXG1P55316 489 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-202ENST00000315962 ZNF121P58317 390 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-202ENST00000315962 B3GALT5-AS1P59052 145 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 RAC1P63000 192 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 RASGEF1BQ0VAM2 473 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 ZP4Q12836 540 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 BAMBIQ13145 260 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 PPP1R1AQ13522 171 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 RBM39Q14498 530 aaKnown RBP6.68□□□□□ -1.34
TRIM55-202ENST00000315962 RAB11BQ15907 218 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 TEX30Q5JUR7 227 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 C5orf46Q6UWT4 87 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 GGNQ86UU5 652 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 OR2AE1Q8NHA4 323 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 TMED6Q8WW62 240 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 MFRPQ9BY79 579 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 ULBP2Q9BZM5 246 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 SELENOIQ9C0D9 397 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 CST11Q9H112 138 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 CALHM2Q9HA72 323 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 KLK13Q9UKR3 277 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 VSIG4Q9Y279 399 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 HDGFL3Q9Y3E1 203 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 PRR14LQ5THK1 2151 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 C5orf51A6NDU8 294 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 OR6C65A6NJZ3 312 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 MPTX1A8MV57 137 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 ZNF705EA8MWA4 302 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-202ENST00000315962 ABCD4O14678 606 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 SYT7O43581 403 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 AQP8O94778 261 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 ACTL6AO96019 429 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 IGHMP01871 453 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 TTRP02766 147 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 IL5P05113 134 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 CSF1P09603 554 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 CALCBP10092 127 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 ROM1Q03395 351 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 IKZF1Q13422 519 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 JMJD6Q6NYC1 403 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-202ENST00000315962 ANKRD16Q6P6B7 361 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 HAGHLQ6PII5 290 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-202ENST00000315962 DNM1P34Q6PK57 102 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 KLHL24Q6TFL4 600 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 HSD17B13Q7Z5P4 300 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-202ENST00000315962 CATSPERDQ86XM0 798 aa6.68□□□□□ -1.34
TRIM55-202ENST00000315962 LDLRAD3Q86YD5 345 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms