RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 A0A1B0GTI1 187 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 A6NLC8 198 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 SRRM5B3KS81 715 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 EI24O14681 340 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 CDIPTO14735 213 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 PLATP00750 562 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 GYPAP02724 150 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 MMP9P14780 707 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 HTR1FP30939 366 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 ISL1P61371 349 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 POU4F2Q12837 409 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 GID4Q8IVV7 300 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 LRRC29Q8WV35 223 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 ZFAND2BQ8WV99 257 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 EME1Q96AY2 570 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 MROQ9BYG7 248 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 RIBC2Q9H4K1 309 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 GPR84Q9NQS5 396 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 CLN8Q9UBY8 286 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 TMEM14AQ9Y6G1 99 aa12.11□□□□□ -0.47
PPP1CA-201ENST00000312989 IGHV3OR15-7A0A075B7D8 119 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 APOL3O95236 402 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 IL5RAQ01344 420 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 EGR3Q06889 387 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 STUMQ69YW2 141 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 C9orf139Q6ZV77 190 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 NLRC3Q7RTR2 1065 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 BOLLQ8N9W6 283 aaKnown RBP12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 OR51G2Q8NGK0 314 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 OR8J1Q8NGP2 316 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 OR51E1Q8TCB6 317 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 RPL3LQ92901 407 aaKnown RBP12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 MBOAT4Q96T53 435 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 MNTQ99583 582 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 RBM4BQ9BQ04 359 aaKnown RBP12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 NUDT16L1Q9BRJ7 211 aaKnown RBP12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 WDR13Q9H1Z4 485 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 RASSF4Q9H2L5 321 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 WARS2Q9UGM6 360 aaKnown RBP12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 ENOPH1Q9UHY7 261 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 NUP50Q9UKX7 468 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 R4GMQ9 66 aa12.1□□□□□ -0.47
PPP1CA-201ENST00000312989 TRAV38-1A0A0B4J264 116 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 ZNF816-ZNF321PA0A0X1KG74 233 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 A0A1W2PQL4 384 aaPredicted RBP12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 J3QRE1 110 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 ADAM20O43506 726 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 CCL1P22362 96 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 NPY4RP50391 375 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 RIDAP52758 137 aaKnown RBP12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 MZT1Q08AG7 82 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 DMRTC1Q5HYR2 192 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 WDR38Q5JTN6 314 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 CCDC121Q6ZUS5 278 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 DOK3Q7L591 496 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 ELMOD2Q8IZ81 293 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 SCCPDHQ8NBX0 429 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 OR14K1Q8NGZ2 314 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 ZNF418Q8TF45 676 aaPredicted RBP12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 PIGCQ92535 297 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 HRASLS5Q96KN8 279 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 MRI1Q9BV20 369 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 OR51I2Q9H344 312 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 V9GYS6 101 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 WNK2Q9Y3S1 2297 aa12.09□□□□□ -0.47
PPP1CA-201ENST00000312989 hCG_1807616A0A1W2PRN6 198 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 TMEM210A6NLX4 147 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 NDUFA2O43678 99 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 RHBDL1O75783 438 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 TFF1P04155 84 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 SELLP14151 372 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 ATP6V1B1P15313 513 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 MUC1P15941 1255 aaPredicted RBP12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 FAHP16930 419 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 GABRB1P18505 474 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 GNALP38405 381 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 ALDH3A2P51648 485 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 ZNF85Q03923 595 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 SCGB2A2Q13296 93 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 ZNF829Q3KNS6 432 aaPredicted RBP12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 ARMCX4Q5H9R4 360 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 SLC25A30Q5SVS4 291 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 ATPAF1Q5TC12 328 aaPredicted RBP12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 ZFP1Q6P2D0 407 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 ZDHHC23Q8IYP9 409 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 FAM216BQ8N7L0 139 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 SIGLECL1Q8N7X8 197 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 OR10Z1Q8NGY1 313 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 ITFG2Q969R8 447 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 FAM71F1Q96KD3 344 aaPredicted RBP12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 RAB3IPQ96QF0 476 aaPredicted RBP12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 TBX15Q96SF7 602 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 MICU1Q9BPX6 476 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 RTL8AQ9BWD3 113 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 MOB1AQ9H8S9 216 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 IKZF2Q9UKS7 526 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 SLC22A13Q9Y226 551 aa12.08□□□□□ -0.48
PPP1CA-201ENST00000312989 IGHV3OR16-10A0A075B7F0 116 aa12.07□□□□□ -0.48
PPP1CA-201ENST00000312989 TRAV40A0A0B4J280 105 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms