RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SFRP5Q5T4F7 317 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 LYSMD4Q5XG99 296 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 H1FOOQ8IZA3 346 aaPredicted RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 WDR31Q8NA23 367 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 NOXO1Q8NFA2 376 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 HLA-CQ95604 372 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 MRPL38Q96DV4 380 aaKnown RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 PRRX2Q99811 253 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 REV1Q9UBZ9 1251 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 MRPS2Q9Y399 296 aaKnown RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 CCL27Q9Y4X3 112 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 TRBV11-1A0A0K0K1C0 115 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ASPDHA6ND91 283 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 CLDN1O95832 211 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 OBP2BQ9NPH6 170 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 PUS1Q9Y606 427 aaKnown RBP eCLIP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF705FA8MVS1 300 aaPredicted RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 J3KTA2 159 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 CFIP05156 583 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF705DP0CH99 300 aaPredicted RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF705BP0CI00 300 aaPredicted RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 SSTR2P30874 369 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 POLR2IP36954 125 aaKnown RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 SLC19A1P41440 591 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 NCR3LG1Q68D85 454 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 MSRB3Q8IXL7 192 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 NAXEQ8NCW5 288 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 VSTM2AQ8TAG5 236 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 APH1AQ96BI3 265 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 B9D1Q9UPM9 204 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 PCDHGA9Q9Y5G4 932 aaKnown RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 PQLC2LA1A4F0 135 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 PHOX2AO14813 284 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ARSJQ5FYB0 599 aaPredicted RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF343Q6P1L6 599 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 TTC9BQ8N6N2 239 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ZBTB44Q8NCP5 570 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 OR4D10Q8NGI6 311 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 OR1N1Q8NGS0 311 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 TMEM167BQ9NRX6 74 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 SLC45A2Q9UMX9 530 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 SSUH2Q9Y2M2 353 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 OR6C68A6NDL8 312 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF727A8MUV8 499 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 IFNL4K9M1U5 179 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 HIST1H1DP16402 221 aaKnown RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 CD82P27701 267 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ADAM5Q6NVV9 412 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 MEX3BQ6ZN04 569 aaKnown RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 TMEM104Q8NE00 496 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 FLVCR2Q9UPI3 526 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 MPC1Q9Y5U8 109 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 DBHP09172 617 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 IGFBP4P22692 258 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF766Q5HY98 468 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ESPNLQ6ZVH7 1005 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 GALMQ96C23 342 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 SMIM7Q9BQ49 75 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 HSF4Q9ULV5 492 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 GEMIN2O14893 280 aaKnown RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 LDB3O75112 727 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 RFC3P40938 356 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 GABRA2P47869 451 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 DGCR2P98153 550 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 SMAGPQ0VAQ4 97 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 SPACA9Q96E40 222 aaPredicted RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 CEBPBP17676 345 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 PKIAP61925 76 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 IKZF1Q13422 519 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF574Q6ZN55 896 aaPredicted RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 OSR2Q8N2R0 312 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 RTN4IP1Q8WWV3 396 aaPredicted RBP7.94□□□□□ -1.14
COL6A5-202ENST00000312481 SLC23A2Q9UGH3 650 aa7.94□□□□□ -1.14
COL6A5-202ENST00000312481 FBXO24O75426 580 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 FGF2P09038 288 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 PIGPP57054 158 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 NRN1LQ496H8 165 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 OR5D13Q8NGL4 314 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 C4orf45Q96LM5 186 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 PDCD1LG2Q9BQ51 273 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 IKZF5Q9H5V7 419 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 OR5AC2Q9NZP5 309 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 KIAA1456Q9P272 454 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 CES1P1Q9UKY3 287 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 OR5AC1P0C628 307 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 PSMB10P40306 273 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 FAM78AQ5JUQ0 283 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 ZDHHC23Q8IYP9 409 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 MRPL24Q96A35 216 aaKnown RBP7.93□□□□□ -1.14
COL6A5-202ENST00000312481 NAA60Q9H7X0 242 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 C5AR2Q9P296 337 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 TRAPPC2LQ9UL33 140 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 LAMTOR5O43504 91 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 TXNDC12O95881 172 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 ROM1Q03395 351 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 ACKR1Q16570 336 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 WDR74Q6RFH5 385 aaPredicted RBP7.93□□□□□ -1.14
COL6A5-202ENST00000312481 TOE1Q96GM8 510 aaKnown RBP7.93□□□□□ -1.14
COL6A5-202ENST00000312481 WDR61Q9GZS3 305 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms