RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 NAXDQ8IW45 347 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 PHYHIPQ92561 330 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 GPR173Q9NS66 373 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 PRR14LQ5THK1 2151 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 VSTM2BA6NLU5 285 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 PRSS44E7EML9 344 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 DBHP09172 617 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF121P58317 390 aaPredicted RBP12.93□□□□□ -0.34
PTPN9-201ENST00000306726 RPS16P62249 146 aaKnown RBP12.93□□□□□ -0.34
PTPN9-201ENST00000306726 MEF2DQ14814 521 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 GKN2Q86XP6 184 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 MAML2Q8IZL2 1156 aaPredicted RBP12.93□□□□□ -0.34
PTPN9-201ENST00000306726 FNDC9Q8TBE3 224 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 SFT2D1Q8WV19 159 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF764Q96H86 408 aaPredicted RBP12.93□□□□□ -0.34
PTPN9-201ENST00000306726 TGIF2Q9GZN2 237 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF160Q9HCG1 818 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 LANCL2Q9NS86 450 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 OR6C65A6NJZ3 312 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 C3orf80F5H4A9 247 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 ABHD16AO95870 558 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 CRHP06850 196 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 SMIM10L1P0DMW3 83 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF43P17038 809 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF41P51814 821 aaPredicted RBP12.93□□□□□ -0.34
PTPN9-201ENST00000306726 NXPH1P58417 271 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 SLC26A5P58743 744 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 HSF1Q00613 529 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF674Q2M3X9 581 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 VASH2Q86V25 355 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 SULF2Q8IWU5 870 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 DAZLQ92904 295 aaKnown RBP12.93□□□□□ -0.34
PTPN9-201ENST00000306726 CTHRC1Q96CG8 243 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 SMIM10Q96HG1 83 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 CDRT15L2A8MXV6 281 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 BET1O15155 118 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 SLC37A1P57057 533 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 FOXF1Q12946 379 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF141Q15928 474 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 EIF2S3LQ2VIR3 472 aaKnown RBP12.93□□□□□ -0.34
PTPN9-201ENST00000306726 SLC22A24Q8N4F4 322 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 LRRC61Q9BV99 259 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 ZFP57Q9NU63 452 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 PCOLCE2Q9UKZ9 415 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 NBEAQ8NFP9 2946 aa12.93□□□□□ -0.34
PTPN9-201ENST00000306726 MEGF11A6BM72 1044 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 H0YIZ8 118 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 ADCYAP1P18509 176 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 LPAR6P43657 344 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 CLDN17P56750 224 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 RAET1LQ5VY80 246 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 DNM1P34Q6PK57 102 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 TMEM229BQ8NBD8 167 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 NMNAT2Q9BZQ4 307 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 A8MVM7 634 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 RAB27BO00194 218 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 SCGNO76038 276 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 AQP8O94778 261 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 ASAH2BP0C7U1 165 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 LAP3P28838 519 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 MEOX2P50222 304 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 EGR3Q06889 387 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 CEBPEQ15744 281 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 MIDNQ504T8 468 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 TERB2Q8NHR7 220 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 STT3BQ8TCJ2 826 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 NAA11Q9BSU3 229 aaPredicted RBP12.92□□□□□ -0.34
PTPN9-201ENST00000306726 SDHAF3Q9NRP4 125 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 RAB22AQ9UL26 194 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 R4GMQ9 66 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 TRBV5-5A0A0J9YX44 114 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 TRBV11-1A0A0K0K1C0 115 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 C5orf63A6NC05 138 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 ONECUT2O95948 504 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 ITGB2P05107 769 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 PNLIPRP2P54317 469 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 USF2Q15853 346 aaPredicted RBP12.92□□□□□ -0.34
PTPN9-201ENST00000306726 SHEQ5VZ18 495 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 OR14K1Q8NGZ2 314 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 TXNIPQ9H3M7 391 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 C1orf198Q9H425 327 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF304Q9HCX3 659 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 FSCN3Q9NQT6 498 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 RIF1Q5UIP0 2472 aaKnown RBP12.92□□□□□ -0.34
PTPN9-201ENST00000306726 DOCK11Q5JSL3 2073 aa12.92□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF727A8MUV8 499 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 WRBO00258 174 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 CST7O76096 145 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 HEXBP07686 556 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 ANKRD55Q3KP44 614 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 ASPHD2Q6ICH7 369 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 C1QL2Q7Z5L3 287 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 ZFP62Q8NB50 900 aaPredicted RBP12.91□□□□□ -0.34
PTPN9-201ENST00000306726 PFDN5Q99471 154 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 URM1Q9BTM9 101 aaKnown RBP12.91□□□□□ -0.34
PTPN9-201ENST00000306726 MRI1Q9BV20 369 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF442Q9H7R0 627 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 KCNJ16Q9NPI9 418 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 KIR2DS5A0A0G2JLQ3 304 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 A0A0G2JNG1 304 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms