RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 C8orf44Q96CB5 159 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 SLC39A13Q96H72 371 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 NPAS1Q99742 590 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 LAT2Q9GZY6 243 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 SLC25A22Q9H936 323 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 PPT2Q9UMR5 302 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 HS3ST2Q9Y278 367 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 SPRY1O43609 319 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM267Q0VDI3 215 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-201ENST00000302528 PMS2P11Q13670 270 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 CGB2Q6NT52 195 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 DOLPP1Q86YN1 238 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 GPR137Q96N19 417 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 CMC2Q9NRP2 79 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 SLC7A10Q9NS82 523 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 MED29Q9NX70 200 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 BCL3P20749 454 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 DIO1P49895 249 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 FUT6P51993 359 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 RPL18Q07020 188 aaKnown RBP9.37□□□□□ -0.91
CLIP1-201ENST00000302528 ATP6V1FQ16864 119 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 Q6ZN92 141 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 ADPRHL1Q8NDY3 354 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 IL22RA2Q969J5 263 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 CLDN23Q96B33 292 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 NEIL1Q96FI4 390 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-201ENST00000302528 C19orf43Q9BQ61 176 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 UBR2Q8IWV8 1755 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 A0A1W2PN81 502 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 SNRPGP15A8MWD9 76 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 M0R2Z0 102 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 M0R3E3 92 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 PPIHO43447 177 aaKnown RBP9.37□□□□□ -0.91
CLIP1-201ENST00000302528 SLCO2B1O94956 709 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 CST2P09228 141 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 CHRNA7P36544 502 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 ELFN2Q5R3F8 820 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 WDR74Q6RFH5 385 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-201ENST00000302528 VRK3Q8IV63 474 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 SLC26A10Q8NG04 563 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 OR2Z1Q8NG97 314 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 SLC37A2Q8TED4 501 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 SIGLEC11Q96RL6 698 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 FOXQ1Q9C009 403 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 SIPA1L3O60292 1781 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-201ENST00000302528 SP1P08047 785 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 FGF2P09038 288 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 TCTN1Q2MV58 587 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM102Q8N9M5 508 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-201ENST00000302528 OR1L3Q8NH93 324 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 ST8SIA1Q92185 356 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 PDXPQ96GD0 296 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 S1PR5Q9H228 398 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 PRO1933Q9H354 126 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 TCFL5Q9UL49 500 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 A0A1B0GUH1 482 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 PRSS37A4D1T9 235 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 DSCR3O14972 297 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 OR4A8P0C604 315 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 B2MP61769 119 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM241Q24JQ0 296 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 MICBQ29980 383 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 DHRS4L2Q6PKH6 230 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 DHRS13Q6UX07 377 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 LYG1Q8N1E2 194 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 TP53RKQ96S44 253 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 C19orf53Q9UNZ5 99 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-201ENST00000302528 MYH1P12882 1939 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 MYH4Q9Y623 1939 aa9.37□□□□□ -0.91
CLIP1-201ENST00000302528 ZNF195O14628 629 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 HOXC11O43248 304 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-201ENST00000302528 FCGR3BO75015 233 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 ICOSLGO75144 302 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 GPANK1O95872 356 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 LYZP61626 148 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 PPP2CBP62714 309 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 WDR73Q6P4I2 378 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 SDF2Q99470 211 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 WSB2Q9NYS7 404 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-201ENST00000302528 DOK5Q9P104 306 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 SLC22A13Q9Y226 551 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 IFITM5A6NNB3 132 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 TNFSF15O95150 251 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 CSF2RBP32927 897 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 C21orf58P58505 322 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 GPNMBQ14956 572 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 TOMM34Q15785 309 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-201ENST00000302528 MIDNQ504T8 468 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 GLCCI1Q86VQ1 547 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 CXorf67Q86X51 503 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-201ENST00000302528 CLRN3Q8NCR9 226 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 UBE2FQ969M7 185 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 OR2J1Q9GZK6 312 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 SRD5A3Q9H8P0 318 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 DAPP1Q9UN19 280 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 CLDN34H7C241 214 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 PLPP1O14494 284 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 FUCA1P04066 466 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 CTSLP07711 333 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms