RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 RPUSD3Q6P087 351 aaKnown RBP9.62□□□□□ -0.87
ZNF558-201ENST00000301475 ARHGEF39Q8N4T4 335 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 SLC26A10Q8NG04 563 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 NTNG2Q96CW9 530 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 CENPMQ9NSP4 180 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 ZDHHC8Q9ULC8 765 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 MYO7BQ6PIF6 2116 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 SEC16AO15027 2179 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 IGKV1D-43A0A0B4J1Z2 117 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 SOD3P08294 240 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 GSTP1P09211 210 aaKnown RBP9.62□□□□□ -0.87
ZNF558-201ENST00000301475 CXCL1P09341 107 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 BTF3P20290 206 aaKnown RBP9.62□□□□□ -0.87
ZNF558-201ENST00000301475 C5AR1P21730 350 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 CXCR1P25024 350 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF93P35789 620 aaPredicted RBP9.62□□□□□ -0.87
ZNF558-201ENST00000301475 SEC13P55735 322 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 SLC35A1P78382 337 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 SURF2Q15527 256 aaPredicted RBP9.62□□□□□ -0.87
ZNF558-201ENST00000301475 GLIPR1L1Q6UWM5 242 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 HIST2H3AQ71DI3 136 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 NUP54Q7Z3B4 507 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 PRR22Q8IZ63 422 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 GALNT14Q96FL9 552 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 GPR61Q9BZJ8 451 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 SDHAF3Q9NRP4 125 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 FAM206AQ9NX38 181 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 LUZP4Q9P127 313 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 FBLN5Q9UBX5 448 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 ATXN7L1Q9ULK2 861 aaPredicted RBP9.62□□□□□ -0.87
ZNF558-201ENST00000301475 FIGNL2A6NMB9 653 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 SYT7O43581 403 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HCRTR2O43614 444 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 CDC14BO60729 498 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HIST1H2BKO60814 126 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 SCGB1D2O95969 90 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HIST1H2BJP06899 126 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HIST1H2BOP23527 126 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HIST1H2BBP33778 126 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 OR3A4PP47883 348 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF84P51523 738 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HIST1H2BDP58876 126 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HIST1H2BCP62807 126 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 IGLV3-21P80748 117 aaPredicted RBP9.61□□□□□ -0.87
ZNF558-201ENST00000301475 SHHQ15465 462 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HIST2H2BEQ16778 126 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.61□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF529Q6P280 563 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 RHBDD1Q8TEB9 315 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 Q8WTZ3 238 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HPSE2Q8WWQ2 592 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HIST1H2BHQ93079 126 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 MRPL24Q96A35 216 aaKnown RBP9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HIST1H2BNQ99877 126 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HIST1H2BMQ99879 126 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 RARRES2Q99969 163 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 SOX7Q9BT81 388 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 NXF5Q9H1B4 397 aaKnown RBP9.61□□□□□ -0.87
ZNF558-201ENST00000301475 EHFQ9NZC4 300 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 B3GALT5Q9Y2C3 310 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 TMEM184BQ9Y519 407 aaPredicted RBP9.61□□□□□ -0.87
ZNF558-201ENST00000301475 A8MVM7 634 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 SLC31A2O15432 143 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 SEC11BP0C7V7 166 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 ANOS1P23352 680 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 C14orf28Q4W4Y0 310 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 KHDC3LQ587J8 217 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 REC114Q7Z4M0 266 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 GALNTL5Q7Z4T8 443 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 TCTN2Q96GX1 697 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 ST6GALNAC5Q9BVH7 336 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 MTIF3Q9H2K0 278 aaKnown RBP9.61□□□□□ -0.87
ZNF558-201ENST00000301475 PRO1933Q9H354 126 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 PRTFDC1Q9NRG1 225 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 TUBD1Q9UJT1 453 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 SRPK3Q9UPE1 567 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 MRPS28Q9Y2Q9 187 aaKnown RBP9.61□□□□□ -0.87
ZNF558-201ENST00000301475 HS3ST3B1Q9Y662 390 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 A0A0J9YY10 115 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 ADH1BP00325 375 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 CHRM2P08172 466 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 RNH1P13489 461 aaKnown RBP9.61□□□□□ -0.87
ZNF558-201ENST00000301475 IL11P20809 199 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 FOXK1P85037 733 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 GPM6BQ13491 265 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF610Q8N9Z0 462 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 FNDC9Q8TBE3 224 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 SCGB3A2Q96PL1 93 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 ADOQ96SZ5 270 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 OR11A1Q9GZK7 315 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 SMOC1Q9H4F8 434 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 PPP4R1LQ9P1A2 415 aa9.61□□□□□ -0.87
ZNF558-201ENST00000301475 RCL1Q9Y2P8 373 aaKnown RBP9.61□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF726A6NNF4 738 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 IL33O95760 270 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 PRH1P02810 166 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 H2BFMP0C1H6 154 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 CHATP28329 748 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 CRABP1P29762 137 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 DDTP30046 118 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms