RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 MEIKINA0A087WXM9 373 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 MBPP02686 304 aaPredicted RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 GYPAP02724 150 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 PMP22Q01453 160 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 FAM71E1Q6IPT2 247 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 LILRA3Q8N6C8 439 aaPredicted RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 COMMD5Q9GZQ3 224 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 GDF2Q9UK05 429 aaPredicted RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 NPPBP16860 134 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 ZNF26P17031 533 aaPredicted RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 CDC34P49427 236 aaPredicted RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 DUSP5Q16690 384 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 SAPCD1Q5SSQ6 148 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 WDFY2Q96P53 400 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 TMEM191AQ9H0A3 160 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 NRAPQ86VF7 1730 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 ACOT8O14734 319 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 AREGP15514 252 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 RPS23P62266 143 aaKnown RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 NKAIN1Q4KMZ8 207 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 OR4C16Q8NGL9 310 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 OR2A14Q96R47 310 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 LYRM4Q9HD34 91 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 SIT1Q9Y3P8 196 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 SFTPCP11686 197 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 CSF2RBP32927 897 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 HAAOP46952 286 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 ZNF345Q14585 488 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 BPIFA4PQ86YQ2 179 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 ZNF687Q8N1G0 1237 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 TRMT61AQ96FX7 289 aaKnown RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 PDXPQ96GD0 296 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 ZNF346Q9UL40 294 aaKnown RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 POLDIP2Q9Y2S7 368 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 H3BP45 60 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 MRPS21P82921 87 aaKnown RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 HLXQ14774 488 aaPredicted RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 PNLIPRP3Q17RR3 467 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 C17orf78Q8N4C9 275 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 MARCH1Q8TCQ1 289 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 BLNKQ8WV28 456 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 DOK1Q99704 481 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 COL25A1Q9BXS0 654 aaPredicted RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 Q9N2K0 584 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 ASIC5Q9NY37 505 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 PPT2Q9UMR5 302 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 HS3ST2Q9Y278 367 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 DDX60LQ5H9U9 1706 aaKnown RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 XRCC2O43543 280 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 GNG4P50150 75 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 RPL18Q07020 188 aaKnown RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 MIDNQ504T8 468 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 ABHD17CQ6PCB6 329 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 SLC16A11Q8NCK7 471 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 TMEM189-UBE2V1I3L0A0 370 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 K7ESM1 405 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 BMPR1BO00238 502 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 PPM1DO15297 605 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 DDTP30046 118 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 PCP4P48539 62 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 PJVKQ0ZLH3 352 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 CCSMST1Q4G0I0 132 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 STAC2Q6ZMT1 411 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 UBE3DQ7Z6J8 389 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 ARHGEF39Q8N4T4 335 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 UBALD1Q8TB05 177 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 RAB37Q96AX2 223 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 PECRQ9BY49 303 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 GABARAPL3Q9BY60 117 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 WDR61Q9GZS3 305 aaKnown RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 DLL4Q9NR61 685 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 PQLC2LA1A4F0 135 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 CLDN34H7C241 214 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 PI3P19957 117 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 DEFB108BQ8NET1 73 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 OR4S1Q8NGB4 309 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 SLC25A43Q8WUT9 341 aaPredicted RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 WDR89Q96FK6 387 aaPredicted RBP5.03□□□□□ -1.6
CPSF2-201ENST00000298875 ADAMTS5Q9UNA0 930 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 ST3GAL6Q9Y274 331 aa5.03□□□□□ -1.6
CPSF2-201ENST00000298875 A0A1B0GTW7 788 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 GJA4P35212 333 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 EMDP50402 254 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 GGNBP1Q5YKI7 109 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 Q6ZN92 141 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 C11orf40Q8WZ69 217 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 LINC00862A6NCI5 91 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 DHODHQ02127 395 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 NHLH1Q02575 133 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 TMEM81Q6P7N7 255 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 C6orf15Q6UXA7 325 aaPredicted RBP5.02□□□□□ -1.61
CPSF2-201ENST00000298875 OR2A1Q8NGT9 310 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 RNF2Q99496 336 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 DEFB127Q9H1M4 99 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 OR51B4Q9Y5P0 310 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 CRXO43186 299 aaPredicted RBP5.02□□□□□ -1.61
CPSF2-201ENST00000298875 CRYABP02511 175 aaKnown RBP5.02□□□□□ -1.61
CPSF2-201ENST00000298875 MT-ND6P03923 174 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 PMS2P11Q13670 270 aa5.02□□□□□ -1.61
CPSF2-201ENST00000298875 TRMT12Q53H54 448 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms