RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 MRPL37Q9BZE1 423 aaKnown RBP12.98□□□□□ -0.33
CCDC140-201ENST00000295226 SRRQ9GZT4 340 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 HHLA2Q9UM44 414 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 CENPEQ02224 2701 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 TMEM127O75204 238 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 OR4A8P0C604 315 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 FAHP16930 419 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 ACHEP22303 614 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 CCL1P22362 96 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 GCH1P30793 250 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 ACSM3Q53FZ2 586 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 FAM131AQ6UXB0 335 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 DOK3Q7L591 496 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 OR8H2Q8N162 312 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 PLPP7Q8NBV4 271 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 SYNPRQ8TBG9 265 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 GPR148Q8TDV2 347 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 TSEN15Q8WW01 171 aaKnown RBP12.97□□□□□ -0.33
CCDC140-201ENST00000295226 GTF3AQ92664 365 aaKnown RBP12.97□□□□□ -0.33
CCDC140-201ENST00000295226 FGGYQ96C11 551 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 HAVCR1Q96D42 359 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 ADAT3Q96EY9 351 aaPredicted RBP12.97□□□□□ -0.33
CCDC140-201ENST00000295226 SDHCQ99643 169 aaPredicted RBP12.97□□□□□ -0.33
CCDC140-201ENST00000295226 PPIL3Q9H2H8 161 aaKnown RBP12.97□□□□□ -0.33
CCDC140-201ENST00000295226 MIXL1Q9H2W2 232 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 PIGLQ9Y2B2 252 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 CELSR2Q9HCU4 2923 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 AKAP6Q13023 2319 aa12.97□□□□□ -0.33
CCDC140-201ENST00000295226 CD300LBA8K4G0 201 aa12.96□□□□□ -0.33
CCDC140-201ENST00000295226 J3QW42 95 aa12.96□□□□□ -0.33
CCDC140-201ENST00000295226 GATBO75879 557 aaKnown RBP12.96□□□□□ -0.33
CCDC140-201ENST00000295226 DHRS3O75911 302 aa12.96□□□□□ -0.33
CCDC140-201ENST00000295226 RAC2P15153 192 aa12.96□□□□□ -0.33
CCDC140-201ENST00000295226 ZNF250P15622 560 aa12.96□□□□□ -0.33
CCDC140-201ENST00000295226 YIF1BQ5BJH7 314 aa12.96□□□□□ -0.33
CCDC140-201ENST00000295226 MBNL2Q5VZF2 373 aaKnown RBP12.96□□□□□ -0.33
CCDC140-201ENST00000295226 ZNF295-AS1Q8N0V1 137 aa12.96□□□□□ -0.33
CCDC140-201ENST00000295226 NEURL2Q9BR09 285 aa12.96□□□□□ -0.33
CCDC140-201ENST00000295226 RGCCQ9H4X1 137 aa12.96□□□□□ -0.33
CCDC140-201ENST00000295226 PURGQ9UJV8 347 aaKnown RBP12.96□□□□□ -0.33
CCDC140-201ENST00000295226 RHBDD3Q9Y3P4 386 aa12.96□□□□□ -0.33
CCDC140-201ENST00000295226 V9GYS6 101 aa12.96□□□□□ -0.33
CCDC140-201ENST00000295226 TRBV5-5A0A0J9YX44 114 aa12.96□□□□□ -0.34
CCDC140-201ENST00000295226 CTAG2O75638 210 aa12.96□□□□□ -0.34
CCDC140-201ENST00000295226 SC5DO75845 299 aa12.96□□□□□ -0.34
CCDC140-201ENST00000295226 ARL6IP5O75915 188 aa12.96□□□□□ -0.34
CCDC140-201ENST00000295226 RPS23P62266 143 aaKnown RBP12.96□□□□□ -0.34
CCDC140-201ENST00000295226 RIN1Q13671 783 aa12.96□□□□□ -0.34
CCDC140-201ENST00000295226 CEACAM19Q7Z692 300 aa12.96□□□□□ -0.34
CCDC140-201ENST00000295226 SEMA6DQ8NFY4 1073 aa12.96□□□□□ -0.34
CCDC140-201ENST00000295226 DVL3Q92997 716 aaPredicted RBP12.96□□□□□ -0.34
CCDC140-201ENST00000295226 MRPL24Q96A35 216 aaKnown RBP12.96□□□□□ -0.34
CCDC140-201ENST00000295226 ZNF442Q9H7R0 627 aa12.96□□□□□ -0.34
CCDC140-201ENST00000295226 ZNF275Q9NSD4 429 aaPredicted RBP12.96□□□□□ -0.34
CCDC140-201ENST00000295226 DHDHQ9UQ10 334 aa12.96□□□□□ -0.34
CCDC140-201ENST00000295226 TRAV1-2A0A0B4J238 106 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 FAM221AA4D161 298 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 ZNF879B4DU55 563 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 PIN1P1O15428 100 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 TIMM8AO60220 97 aaPredicted RBP12.95□□□□□ -0.34
CCDC140-201ENST00000295226 MTRF1O75570 445 aaKnown RBP12.95□□□□□ -0.34
CCDC140-201ENST00000295226 SERPINF1P36955 418 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 MAP2K3P46734 347 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 KLF3P57682 345 aaPredicted RBP12.95□□□□□ -0.34
CCDC140-201ENST00000295226 OR8B8Q15620 311 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 ZNF79Q15937 498 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 PLK3Q9H4B4 646 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 UBTD1Q9HAC8 227 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 MSL2Q9HCI7 577 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 NOX4Q9NPH5 578 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 TAAR3PQ9P1P4 343 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 ZNF391Q9UJN7 358 aa12.95□□□□□ -0.34
CCDC140-201ENST00000295226 IL7P13232 177 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 APOBEC3AP31941 199 aaPredicted RBP12.94□□□□□ -0.34
CCDC140-201ENST00000295226 GNALP38405 381 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 ALDH3B1P43353 468 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 EVX1P49640 407 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 RIPPLY1Q0D2K3 151 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 ASAH1Q13510 395 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 MST1LQ2TV78 715 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 Q499Y3 187 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 ZMAT1Q5H9K5 638 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 ASPHD2Q6ICH7 369 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 CCBE1Q6UXH8 406 aaPredicted RBP12.94□□□□□ -0.34
CCDC140-201ENST00000295226 UNQ9370/PRO34162Q6UXP9 181 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 Q6ZSR3 168 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 C1orf174Q8IYL3 243 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 CADM3Q8N126 398 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 CHAC2Q8WUX2 184 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 PIGCQ92535 297 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 TMEM106AQ96A25 262 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 DHRS9Q9BPW9 319 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 SOSTQ9BQB4 213 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 COMMD3Q9UBI1 195 aa12.94□□□□□ -0.34
CCDC140-201ENST00000295226 TACC2O95359 2948 aa12.93□□□□□ -0.34
CCDC140-201ENST00000295226 IGLV3-9A0A075B6K5 115 aa12.93□□□□□ -0.34
CCDC140-201ENST00000295226 LOC390937A0A1W2PQ73 354 aa12.93□□□□□ -0.34
CCDC140-201ENST00000295226 ZNF850A8MQ14 1090 aa12.93□□□□□ -0.34
CCDC140-201ENST00000295226 H0YL77 283 aa12.93□□□□□ -0.34
CCDC140-201ENST00000295226 HS3ST1O14792 307 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms