RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TOR2AQ5JU69 321 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 ZNF529Q6P280 563 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 C3P1Q6ZMU1 363 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 ZNF813Q6ZN06 617 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 SLC22A24Q8N4F4 322 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 JAGN1Q8N5M9 183 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 GJC3Q8NFK1 279 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 OR51A2Q8NGJ7 313 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 AQP3Q92482 292 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 PRDM14Q9GZV8 571 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 KCNK15Q9H427 330 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 TMEM138Q9NPI0 162 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 CGGBP1Q9UFW8 167 aaPredicted RBP14.71□□□□□ -0.05
CPSF4-201ENST00000292476 LIPGQ9Y5X9 500 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 TNRC6AQ8NDV7 1962 aaKnown RBP14.71□□□□□ -0.05
CPSF4-201ENST00000292476 ZNF878C9JN71 531 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 K7EM74 188 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 B3GALNT1O75752 331 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 CRYZL1O95825 349 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 CRYABP02511 175 aaKnown RBP14.71□□□□□ -0.06
CPSF4-201ENST00000292476 ACSM4P0C7M7 580 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 RRASP10301 218 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 M6PRP20645 277 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 SPOCK1Q08629 439 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 NHLRC3Q5JS37 347 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 LPCAT3Q6P1A2 487 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF627Q7L945 461 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 LINC00346Q8IVM7 164 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 MUC20Q8N307 709 aaPredicted RBP14.71□□□□□ -0.06
CPSF4-201ENST00000292476 OR52B4Q8NGK2 314 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 FNDC9Q8TBE3 224 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 TNFAIP8L1Q8WVP5 186 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 CENPMQ9NSP4 180 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 GDF2Q9UK05 429 aaPredicted RBP14.71□□□□□ -0.06
CPSF4-201ENST00000292476 TP53TG5Q9Y2B4 290 aa14.71□□□□□ -0.06
CPSF4-201ENST00000292476 KALRNO60229 2985 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 ALPK2Q86TB3 2170 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 BSNQ9UPA5 3926 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 TMEM82A0PJX8 343 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 OR14I1A6ND48 311 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 SLC22A20A6NK97 555 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF736B4DX44 427 aaPredicted RBP14.7□□□□□ -0.06
CPSF4-201ENST00000292476 TTRP02766 147 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 TBPP20226 339 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 CALCRP30988 508 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 S100A11P31949 105 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 CDAP32320 146 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 GRB2P62993 217 aaKnown RBP14.7□□□□□ -0.06
CPSF4-201ENST00000292476 PMP22Q01453 160 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 TAF13Q15543 124 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 CLVS2Q5SYC1 327 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 FAM27BQ5VT28 67 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 COMMD7Q86VX2 200 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 FAM46BQ96A09 425 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 PBOV1Q9GZY1 135 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 SPRR3Q9UBC9 169 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 TUBD1Q9UJT1 453 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 LHFPL6Q9Y693 200 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 MED12Q93074 2177 aa14.7□□□□□ -0.06
CPSF4-201ENST00000292476 DISC1C4P0D8 188 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 P2RY10O00398 339 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 CFDP00746 253 aaPredicted RBP14.69□□□□□ -0.06
CPSF4-201ENST00000292476 APOC1P02654 83 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 PDGFAP04085 211 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF735P0CB33 412 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 SFTPCP11686 197 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 PPP3CBP16298 524 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 H2BFSP57053 126 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 SRSF4Q08170 494 aaKnown RBP14.69□□□□□ -0.06
CPSF4-201ENST00000292476 PHYHD1Q5SRE7 291 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 IDO2Q6ZQW0 420 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 ABHD12BQ7Z5M8 362 aaPredicted RBP14.69□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF584Q8IVC4 421 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF843Q8N446 348 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 OR1M1Q8NGA1 313 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 OR5D14Q8NGL3 314 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF775Q96BV0 537 aaPredicted RBP14.69□□□□□ -0.06
CPSF4-201ENST00000292476 PRRT1Q99946 306 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 CRLF2Q9HC73 371 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 PLSCR2Q9NRY7 297 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 ASH2LQ9UBL3 628 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 SLC5A6Q9Y289 635 aa14.69□□□□□ -0.06
CPSF4-201ENST00000292476 GOSR2O14653 212 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 SYT7O43581 403 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 RP2O75695 350 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF35P13682 527 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 RPA2P15927 270 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 ARPC4P59998 168 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 PCBD1P61457 104 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 QRFPP83859 136 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 FAM189A2Q15884 450 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF260Q3ZCT1 412 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 C4orf46Q504U0 113 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 CORO6Q6QEF8 472 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 OR2W3Q7Z3T1 314 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 TUSC5Q8IXB3 177 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 OR4D6Q8NGJ1 314 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 APH1AQ96BI3 265 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 POFUT1Q9H488 388 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 NUP50Q9UKX7 468 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms