RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ZFP36L2P47974 494 aaKnown RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 PSMD8P48556 350 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 KLK7P49862 253 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 RASSF2P50749 326 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 SSR4P51571 173 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 RIDAP52758 137 aaKnown RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 STC1P52823 247 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 CLDN12P56749 244 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 RPL8P62917 257 aaKnown RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 LTBQ06643 244 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 UNC119Q13432 240 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 KRR1Q13601 381 aaKnown RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 FHL1Q13642 323 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 GGTLC2Q14390 218 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 SMCO1Q147U7 214 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 KIR2DS1Q14954 304 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 CD226Q15762 336 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 NDUFA5Q16718 116 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 FAM106AQ4KMX7 169 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 VWA2Q5GFL6 755 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 OR10J3Q5JRS4 329 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 TEX30Q5JUR7 227 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 CPTPQ5TA50 214 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 OTUD1Q5VV17 481 aaPredicted RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 OR8G2PQ6IF36 304 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 TYW3Q6IPR3 259 aaKnown RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 PWWP2BQ6NUJ5 590 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 MED27Q6P2C8 311 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 WDR59Q6PJI9 974 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 CCNI2Q6ZMN8 369 aaPredicted RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 Q6ZSV7 163 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 CREB3L2Q70SY1 520 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 LHFPL3Q86UP9 236 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 PHF13Q86YI8 300 aaPredicted RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 BPIFB2Q8N4F0 458 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 DCAF4L2Q8NA75 395 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 ZNF740Q8NDX6 193 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 DUSP18Q8NEJ0 188 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 OR1M1Q8NGA1 313 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 OR51D1Q8NGF3 324 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 OR11L1Q8NGX0 322 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 OR5B3Q8NH48 314 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 OR10J5Q8NHC4 309 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 FAM45AQ8TCE6 357 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 MCOLN3Q8TDD5 553 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 SMIM19Q96E16 107 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 HOPXQ9BPY8 73 aaPredicted RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 TMEM109Q9BVC6 243 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 DDA1Q9BW61 102 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 DSN1Q9H410 356 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 TMEM38AQ9H6F2 299 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 RDH14Q9HBH5 336 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 TMEM27Q9HBJ8 222 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 SPANXB1Q9NS25 103 aaPredicted RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 IL17CQ9P0M4 197 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 IL36RNQ9UBH0 155 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 OR12D3Q9UGF7 316 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 COPS3Q9UNS2 423 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 HS3ST2Q9Y278 367 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 MYO15AQ9UKN7 3530 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 FANCMQ8IYD8 2048 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 FAM186AA6NE01 2351 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 GPR179Q6PRD1 2367 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 PTPRDP23468 1912 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 GREB1Q4ZG55 1949 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 ANAPC1Q9H1A4 1944 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 USP34Q70CQ2 3546 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 IGHV4-28A0A0C4DH34 117 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 A0A0D9SEW6 157 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 A0A1B0GV72 72 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 A0A1B0GW55 424 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 RPS10-NUDT3A0A1W2PQS6 291 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 CDC7O00311 574 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 CXCR6O00574 342 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 CCL21O00585 134 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 MRPS12O15235 138 aaKnown RBP3.79□□□□□ -1.8
CD44-202ENST00000278385 SNAP91O60641 907 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 CTSVO60911 334 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 EEDO75530 441 aaKnown RBP3.79□□□□□ -1.8
CD44-202ENST00000278385 CDK2AP2O75956 126 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 GAGE7O76087 117 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 ATP6V1G2O95670 118 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 KRT75O95678 551 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 BCHEP06276 602 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 IGHV4-34P06331 123 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 WNT2P09544 360 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 ACSM4P0C7M7 580 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DUX4L2P0CJ85 424 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DUX4L3P0CJ86 424 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DUX4L4P0CJ87 422 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DUX4L5P0CJ88 424 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DUX4L6P0CJ89 424 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DUX4L7P0CJ90 424 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 GAGE12FP0CL80 117 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 GAGE12GP0CL81 117 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 GAGE12IP0CL82 117 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 LIMS3P0CW19 117 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 LIMS4P0CW20 117 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 GFAPP14136 432 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 CELP19835 753 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms