RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 TOX3O15405 576 aaPredicted RBP7.21□□□□□ -1.26
LIMD1-201ENST00000273317 OR2J2O76002 312 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 FGF2P09038 288 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 MPGP29372 298 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 OR1D5P58170 312 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 ZNF77Q15935 545 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 PYCR3Q53H96 274 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 TOMM20LQ6UXN7 152 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 CCDC190Q86UF4 302 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 OR10G3Q8NGC4 313 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 SMIM14Q96QK8 99 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 SLC35B3Q9H1N7 401 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 COL11A1P12107 1806 aaPredicted RBP7.21□□□□□ -1.26
LIMD1-201ENST00000273317 WDR81Q562E7 1941 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 KRTDAPP60985 99 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 HIST1H3AP68431 136 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 FUT7Q11130 342 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 CLEC12BQ2HXU8 276 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 PPP1R1CQ8WVI7 109 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 ZNF426Q9BUY5 554 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 MARCH5Q9NX47 278 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 SIT1Q9Y3P8 196 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 QSER1Q2KHR3 1735 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 ZNF320A2RRD8 509 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 M0R143 59 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 NDUFB6O95139 128 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 RAB7AP51149 207 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 TCTAP57738 103 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 NKAIN4Q8IVV8 208 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 OSR2Q8N2R0 312 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 OR2M7Q8NG81 312 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 CYSLTR2Q9NS75 346 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 LANCL2Q9NS86 450 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 ZNF121P58317 390 aaPredicted RBP7.21□□□□□ -1.26
LIMD1-201ENST00000273317 SLC2A9Q9NRM0 540 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 DUS4LO95620 317 aaKnown RBP7.21□□□□□ -1.26
LIMD1-201ENST00000273317 CD3DP04234 171 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 IRS1P35568 1242 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 BSGP35613 385 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 GALR1P47211 349 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 ZNF528Q3MIS6 628 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 COX19Q49B96 90 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 OR2A2Q6IF42 318 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 RTN4IP1Q8WWV3 396 aaPredicted RBP7.21□□□□□ -1.26
LIMD1-201ENST00000273317 SLC25A37Q9NYZ2 338 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 ST3GAL6Q9Y274 331 aa7.21□□□□□ -1.26
LIMD1-201ENST00000273317 MED13LQ71F56 2210 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 TRBV5-4A0A0C4DH59 114 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 RRP8O43159 456 aaKnown RBP7.2□□□□□ -1.26
LIMD1-201ENST00000273317 MBTPS2O43462 519 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 GP1BAP07359 652 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 IAPPP10997 89 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 PTHLHP12272 177 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 ATF1P18846 271 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 RPS16P62249 146 aaKnown RBP7.2□□□□□ -1.26
LIMD1-201ENST00000273317 C11orf87Q6NUJ2 197 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 OR52N4Q8NGI2 321 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 HCFC2Q9Y5Z7 792 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 PATJQ8NI35 1801 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 FAM53BQ14153 422 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 ZNF468Q5VIY5 522 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-201ENST00000273317 ACSM5Q6NUN0 579 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 CA13Q8N1Q1 262 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-201ENST00000273317 PARD6AQ9NPB6 346 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 SLC17A2O00624 439 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 SLC19A1P41440 591 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 VMA21Q3ZAQ7 101 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 VWA2Q5GFL6 755 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 GPR32P1Q8NGA4 272 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 MARCH1Q8TCQ1 289 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 ZNF775Q96BV0 537 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-201ENST00000273317 PDFQ9HBH1 243 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 SLC2A8Q9NY64 477 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 SLC45A2Q9UMX9 530 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 PLXNA1Q9UIW2 1896 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 WDR74Q6RFH5 385 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-201ENST00000273317 LSM2Q9Y333 95 aaKnown RBP7.2□□□□□ -1.26
LIMD1-201ENST00000273317 FIGNL2A6NMB9 653 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 CDC34P49427 236 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-201ENST00000273317 C16orf52Q8NHV5 167 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 SPSB1Q96BD6 273 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 ZDBF2Q9HCK1 2354 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 TRAV20A0A0B4J274 112 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 HMX2A2RU54 273 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 CBR3O75828 277 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 MBPP02686 304 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-201ENST00000273317 FOXB2Q5VYV0 432 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 LINC00696Q6ZRV3 163 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 OR1F12Q8NHA8 337 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 SARAFQ96BY9 339 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 ADGRL4Q9HBW9 690 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 RNF224P0DH78 156 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 FGF9P31371 208 aaPredicted RBP7.2□□□□□ -1.26
LIMD1-201ENST00000273317 TM4SF4P48230 202 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 GPM6AP51674 278 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 LRRC10Q5BKY1 277 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 BHLHE23Q8NDY6 225 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 SLC37A2Q8TED4 501 aa7.2□□□□□ -1.26
LIMD1-201ENST00000273317 NUDCD2Q8WVJ2 157 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms