RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 GNGT2O14610 69 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 SELENOFO60613 162 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 TIPRLO75663 272 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 LYNP07948 512 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 H2BFMP0C1H6 154 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 PRR23D2P0DMB1 279 aaPredicted RBP8.04□□□□□ -1.12
VPS41-201ENST00000265745 OSMP13725 252 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 PRKACGP22612 351 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 CSNK2BP67870 215 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 ELF3P78545 371 aaPredicted RBP8.04□□□□□ -1.12
VPS41-201ENST00000265745 IL5RAQ01344 420 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 MICBQ29980 383 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 FAM76BQ5HYJ3 339 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 PRR31Q5SQ13 230 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.04□□□□□ -1.12
VPS41-201ENST00000265745 CPOQ8IVL8 374 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 HS3ST5Q8IZT8 346 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 CSNK2A3Q8NEV1 391 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 THEM6Q8WUY1 208 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 C12orf43Q96C57 262 aaKnown RBP8.04□□□□□ -1.12
VPS41-201ENST00000265745 PGAM5Q96HS1 289 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 CCL13Q99616 98 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 PAPOLGQ9BWT3 736 aaKnown RBP8.04□□□□□ -1.12
VPS41-201ENST00000265745 SIRPDQ9H106 197 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 TLNRD1Q9H1K6 362 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 CNTD2Q9H8S5 307 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 ZNF556Q9HAH1 456 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 KIF17Q9P2E2 1029 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 TANC2Q9HCD6 1990 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 MEGF11A6BM72 1044 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 CDIPTO14735 213 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 PRODHO43272 600 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 E2F6O75461 281 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 CST4P01036 141 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 ANXA8P13928 327 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 AMY2BP19961 511 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 ALOX5APP20292 161 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 ACKR3P25106 362 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 GNALP38405 381 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 NAA10P41227 235 aaPredicted RBP8.03□□□□□ -1.12
VPS41-201ENST00000265745 ARF6P62330 175 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 SNCBQ16143 134 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 GFOD2Q3B7J2 385 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 SLC35D3Q5M8T2 416 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 ATPAF1Q5TC12 328 aaPredicted RBP8.03□□□□□ -1.12
VPS41-201ENST00000265745 METTL11BQ5VVY1 283 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 RUSC1-AS1Q66K80 236 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 KRT74Q7RTS7 529 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 TRPM8Q7Z2W7 1104 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 FTMTQ8N4E7 242 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 PAPD5Q8NDF8 572 aaKnown RBP8.03□□□□□ -1.12
VPS41-201ENST00000265745 BBS1Q8NFJ9 593 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 OR5P3Q8WZ94 311 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 PPP1R14AQ96A00 147 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 TMIGD2Q96BF3 282 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 SEH1LQ96EE3 360 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 FAM71F1Q96KD3 344 aaPredicted RBP8.03□□□□□ -1.12
VPS41-201ENST00000265745 LYZL4Q96KX0 146 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 MICU1Q9BPX6 476 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 ZNF696Q9H7X3 374 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 DNAJB9Q9UBS3 223 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 RPUSD1Q9UJJ7 312 aaKnown RBP8.03□□□□□ -1.12
VPS41-201ENST00000265745 KLHDC2Q9Y2U9 406 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 MMP24Q9Y5R2 645 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 MPC1Q9Y5U8 109 aa8.03□□□□□ -1.12
VPS41-201ENST00000265745 IGHV1-69DA0A0B4J2H0 117 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 A0A1B0GW55 424 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 TCRBV3S1A0A5B6 114 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 FAM181BA6NEQ2 426 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 ANXA2P2A6NMY6 339 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 ZNF850A8MQ14 1090 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 GYG2O15488 501 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 FKBP6O75344 327 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 IGHV1-69P01742 117 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 MELTFP08582 738 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 DUX4L2P0CJ85 424 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 DUX4L3P0CJ86 424 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 DUX4L4P0CJ87 422 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 DUX4L5P0CJ88 424 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 DUX4L6P0CJ89 424 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 DUX4L7P0CJ90 424 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 MDKP21741 143 aaPredicted RBP8.02□□□□□ -1.13
VPS41-201ENST00000265745 SLC2A5P22732 501 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 OMGP23515 440 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 TGM4P49221 684 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 HCCSP53701 268 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 CBX1P83916 185 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 PRDX4Q13162 271 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 FLOT2Q14254 428 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 PDCD1Q15116 288 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 CDONQ4KMG0 1287 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 WDR38Q5JTN6 314 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 TMEM236Q5W0B7 351 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 DUX4L9Q6RFH8 374 aaPredicted RBP8.02□□□□□ -1.13
VPS41-201ENST00000265745 SPATA24Q86W54 205 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 THNSL2Q86YJ6 484 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 FGFRL1Q8N441 504 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 TMEM86BQ8N661 226 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 LY6G5BQ8NDX9 201 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 ST8SIA4Q92187 359 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms