RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 IL23AQ9NPF7 189 aa5.18□□□□□ -1.58
VCAN-201ENST00000265077 PLEKHB1Q9UF11 243 aaPredicted RBP5.18□□□□□ -1.58
VCAN-201ENST00000265077 C2CD3Q4AC94 2353 aa5.18□□□□□ -1.58
VCAN-201ENST00000265077 GREB1LQ9C091 1923 aaPredicted RBP5.18□□□□□ -1.58
VCAN-201ENST00000265077 A0A0A6YYC8 382 aaPredicted RBP5.18□□□□□ -1.58
VCAN-201ENST00000265077 I3L1I5 382 aaPredicted RBP5.18□□□□□ -1.58
VCAN-201ENST00000265077 OMGP23515 440 aa5.18□□□□□ -1.58
VCAN-201ENST00000265077 ARHGAP9Q9BRR9 750 aa5.18□□□□□ -1.58
VCAN-201ENST00000265077 ZPBPQ9BS86 351 aa5.18□□□□□ -1.58
VCAN-201ENST00000265077 ULBP2Q9BZM5 246 aa5.18□□□□□ -1.58
VCAN-201ENST00000265077 AUNIPQ9H7T9 357 aa5.18□□□□□ -1.58
VCAN-201ENST00000265077 TRHRP34981 398 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 RGRP47804 291 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 CRMP1Q14194 572 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 C19orf35Q6ZS72 473 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 ETFBKMTQ8IXQ9 262 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 LINC00597Q9H2U6 94 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 RCC2Q9P258 522 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 TRAPPC2LQ9UL33 140 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 NHSL1Q5SYE7 1610 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 RAB29O14966 203 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 WDR1O75083 606 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 UTS2O95399 124 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 CLDN1O95832 211 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 F13BP05160 661 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 ADRA2CP18825 462 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 DCTDP32321 178 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 INPP5JQ15735 1006 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 KHDC3LQ587J8 217 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 ZNF660Q6AZW8 331 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 TMEM108Q6UXF1 575 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 EMG1Q92979 244 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 ANKHD1Q8IWZ3 2542 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 A0A087WV62 115 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 RPL12P30050 165 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 ZNF90Q03938 601 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 NXPE3Q969Y0 559 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 DUSP23Q9BVJ7 150 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 PPT2Q9UMR5 302 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 LRP5O75197 1615 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 EML6Q6ZMW3 1958 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 PHF1O43189 567 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 CST4P01036 141 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 FCGR2CP31995 323 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 P2RY2P41231 377 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 DNLZQ5SXM8 178 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 MFSD12Q6NUT3 480 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 SLC35A4Q96G79 324 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 LDLRAD4O15165 306 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 HAND1O96004 215 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 SELLP14151 372 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 BTF3P20290 206 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 NPY4RP50391 375 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 MUC20Q8N307 709 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 OR52L2PQ8NGH6 319 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 SERTAD4Q9NUC0 356 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 TAAR2Q9P1P5 351 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 MRPS28Q9Y2Q9 187 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 CARHSP1Q9Y2V2 147 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 FOLR3P41439 243 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 PNRC1Q12796 327 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 SSX1Q16384 188 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 DEFB110Q30KQ9 67 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 PAQR6Q6TCH4 344 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 BTNL3Q6UXE8 466 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 MOB3CQ70IA8 216 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 TNFRSF13CQ96RJ3 184 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 NMNAT3Q96T66 252 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 TLNRD1Q9H1K6 362 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 TMEM131Q92545 1883 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 A0A1W2PNV4 684 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 GAGE10A6NGK3 116 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 KIAA1324LA8MWY0 1029 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 E5RGE8 158 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 TNFSF12O43508 249 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 CYC1P08574 325 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 CD96P40200 585 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 RNLSQ5VYX0 342 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 STUMQ69YW2 141 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 CYHR1Q6ZMK1 362 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 LYG2Q86SG7 212 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 ING1Q9UK53 422 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 NSG2Q9Y328 171 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 WSB1Q9Y6I7 421 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 COL5A3P25940 1745 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 TNRC6AQ8NDV7 1962 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 ITGB1BP1O14713 200 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 EIF4E2O60573 245 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 ZNF728P0DKX0 622 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 VIPR2P41587 438 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 GALR1P47211 349 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 RPL34P49207 117 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 STARD6P59095 220 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 MARCH8Q5T0T0 291 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 ABHD17BQ5VST6 288 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 ORAI1Q96D31 301 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 DCBLD2Q96PD2 775 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 TMEFF2Q9UIK5 374 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 ZDHHC8Q9ULC8 765 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms