RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 NAXEQ8NCW5 288 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 OR10J5Q8NHC4 309 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 ABHD5Q8WTS1 349 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 HPSE2Q8WWQ2 592 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 FRZBQ92765 325 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 PPP1R14AQ96A00 147 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 PTX4Q96A99 478 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 SLC25A36Q96CQ1 311 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 R3HDM4Q96D70 268 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 AMELYQ99218 206 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 ELOVL3Q9HB03 270 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 SCN3AQ9NY46 2000 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 A0A1B0GV50 99 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 MEGF11A6BM72 1044 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 ASAH2BP0C7U1 165 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 PI3P19957 117 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 SUPT4H1P63272 117 aaKnown RBP11.64□□□□□ -0.55
NUP54-201ENST00000264883 SPOCK1Q08629 439 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 FAM53BQ14153 422 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 HNF4GQ14541 408 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 C2orf27AQ580R0 203 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 GPR137CQ8N3F9 429 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 DTWD2Q8NBA8 298 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 OR51A2Q8NGJ7 313 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 OR14C36Q8NHC7 312 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 ADAMTS18Q8TE60 1221 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 ASB5Q8WWX0 329 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 FAM3CQ92520 227 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 FAM46BQ96A09 425 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 SLC25A44Q96H78 314 aaPredicted RBP11.64□□□□□ -0.55
NUP54-201ENST00000264883 OR11A1Q9GZK7 315 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 CD207Q9UJ71 328 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 GOLT1BQ9Y3E0 138 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 GOLGA4Q13439 2230 aaKnown RBP11.64□□□□□ -0.55
NUP54-201ENST00000264883 A0A0J9YY10 115 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 H7C1C5 153 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 SOX15O60248 233 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 IGFBP3P17936 291 aaPredicted RBP11.64□□□□□ -0.55
NUP54-201ENST00000264883 CXCR1P25024 350 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 LCN6P62502 163 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 PRSS41Q7RTY9 318 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 ATG4DQ86TL0 474 aaPredicted RBP11.64□□□□□ -0.55
NUP54-201ENST00000264883 RARRES2Q99969 163 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 SNHG12Q9BXW3 62 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 FBRSQ9HAH7 460 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 CAPN10Q9HC96 672 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 MMP25Q9NPA2 562 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 RAB22AQ9UL26 194 aa11.64□□□□□ -0.55
NUP54-201ENST00000264883 A0A1B0GW64 132 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 ZNF264O43296 627 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 FOXS1O43638 330 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 C1QL1O75973 258 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 EML2O95834 649 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 EDN3P14138 238 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 GNB3P16520 340 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 CTHP32929 405 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 APLNRP35414 380 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 CLDN6P56747 220 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 GPR18Q14330 331 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 NFATC4Q14934 902 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 HIKESHIQ53FT3 197 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 DCXRQ7Z4W1 244 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 C10orf53Q8N6V4 93 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 LFNGQ8NES3 379 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 OR4N2Q8NGD1 307 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 OTOSQ8NHW6 89 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 OR8B4Q96RC9 309 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 OPN3Q9H1Y3 402 aaPredicted RBP11.63□□□□□ -0.55
NUP54-201ENST00000264883 ARV1Q9H2C2 271 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 STRAPQ9Y3F4 350 aaKnown RBP11.63□□□□□ -0.55
NUP54-201ENST00000264883 TMEM269A0A1B0GVZ9 245 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 A6NCN8 305 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 APBB3O95704 486 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 SERPINA2P20848 420 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 DNASE1L1P49184 302 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 PPM1FP49593 454 aaPredicted RBP11.63□□□□□ -0.55
NUP54-201ENST00000264883 HNRNPKP61978 463 aaKnown RBP eCLIP11.63□□□□□ -0.557e-6■□□□□ 8.5
NUP54-201ENST00000264883 IGLV3-21P80748 117 aaPredicted RBP11.63□□□□□ -0.55
NUP54-201ENST00000264883 SLC17A1Q14916 467 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 MEP1BQ16820 701 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 C4orf17Q53FE4 359 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 TMEFF1Q8IYR6 380 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 CARFQ8N187 725 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 OR4D6Q8NGJ1 314 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 OR1E3Q8WZA6 343 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 ACTR3CQ9C0K3 210 aaPredicted RBP11.63□□□□□ -0.55
NUP54-201ENST00000264883 SMDT1Q9H4I9 107 aa11.63□□□□□ -0.55
NUP54-201ENST00000264883 A0A0C4DFX4 3053 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 PRUNE2Q8WUY3 3088 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 ZNF705GA8MUZ8 300 aaPredicted RBP11.62□□□□□ -0.55
NUP54-201ENST00000264883 MASP2O00187 686 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 TNFRSF10CO14798 259 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 PNPP00491 289 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 LMO1P25800 156 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 PPP1CCP36873 323 aaKnown RBP11.62□□□□□ -0.55
NUP54-201ENST00000264883 SUCLG1P53597 346 aaKnown RBP11.62□□□□□ -0.55
NUP54-201ENST00000264883 DLK1P80370 383 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 DGAT2L6Q6ZPD8 337 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 BCORP1Q8N888 145 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 OR10G6Q8NH81 332 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms