RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 TMEM59Q9BXS4 323 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 PIGMQ9H3S5 423 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 KCNK15Q9H427 330 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 KIF25Q9UIL4 384 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 NPIPB13A6NJU9 1138 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 C10orf142B7Z368 130 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 NPIPB4C9JG80 1138 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 FTCDNL1E5RQL4 147 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 BPNT1O95861 308 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 OR8U9P0C7N5 309 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 FAM157BP0CG42 384 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 EDN3P14138 238 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 EFNB2P52799 333 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 RPS27AP62979 156 aaKnown RBP14.47□□□□□ -0.09
CTCF-201ENST00000264010 UBA52P62987 128 aaKnown RBP14.47□□□□□ -0.09
CTCF-201ENST00000264010 ARL6IP1Q15041 203 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 GLIPR1L1Q6UWM5 242 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 TMEM229BQ8NBD8 167 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 OR11H4Q8NGC9 324 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 ZNF775Q96BV0 537 aaPredicted RBP14.47□□□□□ -0.09
CTCF-201ENST00000264010 B4GALT7Q9UBV7 327 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 PCDHB10Q9UN67 800 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 ZNF25P17030 456 aaPredicted RBP14.47□□□□□ -0.09
CTCF-201ENST00000264010 FAM24BQ8N5W8 94 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 ELF5Q9UKW6 265 aaPredicted RBP14.47□□□□□ -0.09
CTCF-201ENST00000264010 TIMM8BQ9Y5J9 83 aaPredicted RBP14.47□□□□□ -0.09
CTCF-201ENST00000264010 WNT11O96014 354 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 FGF5P12034 268 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 ZNF121P58317 390 aaPredicted RBP14.47□□□□□ -0.09
CTCF-201ENST00000264010 RHOUQ7L0Q8 258 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 OR51A2Q8NGJ7 313 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 FRZBQ92765 325 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 GNRHR2Q96P88 292 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 ANKRD10Q9NXR5 420 aa14.47□□□□□ -0.09
CTCF-201ENST00000264010 CCL4P13236 92 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 CLEC12BQ2HXU8 276 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 MAML2Q8IZL2 1156 aaPredicted RBP14.46□□□□□ -0.09
CTCF-201ENST00000264010 DEFB123Q8N688 67 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 BVESQ8NE79 360 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 GAR1Q9NY12 217 aaKnown RBP14.46□□□□□ -0.09
CTCF-201ENST00000264010 A0A087WV48 116 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 TEX13DA0A0J9YY54 714 aaPredicted RBP14.46□□□□□ -0.09
CTCF-201ENST00000264010 CBR3O75828 277 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 FSTP19883 344 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 BTCP35070 178 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 PLGLB1Q02325 96 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 OR56B1Q8NGI3 324 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 OR5H2Q8NGV7 314 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 PHB2Q99623 299 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 GFI1Q99684 422 aa14.46□□□□□ -0.09
CTCF-201ENST00000264010 A0A1W2PPC1 479 aa14.46□□□□□ -0.1
CTCF-201ENST00000264010 EIF3GO75821 320 aaKnown RBP eCLIP14.46□□□□□ -0.1
CTCF-201ENST00000264010 NFYBP25208 207 aa14.46□□□□□ -0.1
CTCF-201ENST00000264010 HLXQ14774 488 aaPredicted RBP14.46□□□□□ -0.1
CTCF-201ENST00000264010 ABHD17BQ5VST6 288 aa14.46□□□□□ -0.1
CTCF-201ENST00000264010 FJX1Q86VR8 437 aa14.46□□□□□ -0.1
CTCF-201ENST00000264010 OR11G2Q8NGC1 345 aa14.46□□□□□ -0.1
CTCF-201ENST00000264010 OR2Y1Q8NGV0 311 aa14.46□□□□□ -0.1
CTCF-201ENST00000264010 DTD1Q8TEA8 209 aa14.46□□□□□ -0.1
CTCF-201ENST00000264010 POFUT1Q9H488 388 aa14.46□□□□□ -0.1
CTCF-201ENST00000264010 H3BMH7 237 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 BET1O15155 118 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 LCATP04180 440 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 GDF1P27539 372 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 CARD18P57730 90 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 OR2B11Q5JQS5 317 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 C6orf15Q6UXA7 325 aaPredicted RBP14.45□□□□□ -0.1
CTCF-201ENST00000264010 SPICQ8N5J4 248 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 MED12Q93074 2177 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 HSPA12AO43301 675 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 TMEM225BP0DP42 221 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 FABP4P15090 132 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 IL13RA1P78552 427 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 AAED1Q7RTV5 226 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 ADPRHL1Q8NDY3 354 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 OR2AK2Q8NG84 335 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 M1APQ8TC57 530 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 NECAB3Q96P71 396 aaPredicted RBP14.45□□□□□ -0.1
CTCF-201ENST00000264010 EYSQ5T1H1 3165 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 PATE3B3GLJ2 98 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 MFAP5Q13361 173 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 SHBQ15464 509 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 ZNF124Q15973 351 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 SPACA5Q96QH8 159 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 MPDZO75970 2070 aa14.45□□□□□ -0.1
CTCF-201ENST00000264010 DHHO43323 396 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 TGOLN2O43493 480 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 SYNGR4O95473 234 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 GLP1RP43220 463 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 TAS2R31P59538 309 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 INPP5JQ15735 1006 aaPredicted RBP14.44□□□□□ -0.1
CTCF-201ENST00000264010 CHRFAM7AQ494W8 412 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 ZNF626Q68DY1 528 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 YRDCQ86U90 279 aaKnown RBP14.44□□□□□ -0.1
CTCF-201ENST00000264010 OR1S2Q8NGQ3 325 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 IGHV3-15A0A0B4J1V0 119 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 A0A1W2PNV4 684 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 RER1O15258 196 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 CPN1P15169 458 aa14.44□□□□□ -0.1
CTCF-201ENST00000264010 HFEQ30201 348 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms