RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 APOBEC1P41238 236 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 TLE1Q04724 770 aa14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 LINC00114Q6XXX2 140 aa14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 NAXDQ8IW45 347 aa14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 PAPOLGQ9BWT3 736 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 IGLV1-36A0A0B4J1U3 117 aa14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 SIGLEC6O43699 453 aa14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 RNF144BQ7Z419 303 aa14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 C1orf210Q8IVY1 113 aa14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 UBALD1Q8TB05 177 aa14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 IFI44Q8TCB0 444 aa14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 ISOC2Q96AB3 205 aa14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 LANCL2Q9NS86 450 aa14.36□□□□□ -0.11
PDZRN3-201ENST00000263666 PRRC2CQ9Y520 2896 aaKnown RBP14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 MPTX1A8MV57 137 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 PLCXD3Q63HM9 321 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 LPCAT3Q6P1A2 487 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 SLC7A11Q9UPY5 501 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 SCGNO76038 276 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 NXPH1P58417 271 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 TMEM128Q5BJH2 165 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 CLEC18BQ6UXF7 455 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 OR5T1Q8NG75 326 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 SPTSSAQ969W0 71 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 RHOFQ9HBH0 211 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 KCNJ16Q9NPI9 418 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 SULT1C2O00338 296 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 CHRM2P08172 466 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 TUBG1P23258 451 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 KISS1Q15726 138 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 SGCZQ96LD1 299 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 HIST1H2AAQ96QV6 131 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 CCNL2Q96S94 520 aaPredicted RBP14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 FAAP24Q9BTP7 215 aa14.35□□□□□ -0.11
PDZRN3-201ENST00000263666 PI4KAP42356 2102 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 RAB27BO00194 218 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 RPS18P62269 152 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 ZNF529Q6P280 563 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 RAB11FIP2Q7L804 512 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 STX12Q86Y82 276 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 SEMA6DQ8NFY4 1073 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 ST7LQ8TDW4 575 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 GPX7Q96SL4 187 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 OR5AC2Q9NZP5 309 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 FLVCR1Q9Y5Y0 555 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 R4GN57 208 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 MEX3AA1L020 520 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 CRHP06850 196 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 CELA2AP08217 269 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 HIST1H1DP16402 221 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 FOLR3P41439 243 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 ISXQ2M1V0 245 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 HSD17B13Q7Z5P4 300 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 M0R135 149 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 PDGFBP01127 241 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 GLAP06280 429 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 B4GALT1P15291 398 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 RPL12P30050 165 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 FAM189A2Q15884 450 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 CDCP2Q5VXM1 449 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 GUSBP11Q6P575 273 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 PUSL1Q8N0Z8 303 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 ASB10Q8WXI3 467 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 ZNF799Q96GE5 643 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 EXOSC3Q9NQT5 275 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 RASL12Q9NYN1 266 aa14.34□□□□□ -0.11
PDZRN3-201ENST00000263666 OR6C76A6NM76 312 aa14.33□□□□□ -0.11
PDZRN3-201ENST00000263666 RAMP1O60894 148 aa14.33□□□□□ -0.11
PDZRN3-201ENST00000263666 PCED1AQ9H1Q7 454 aa14.33□□□□□ -0.11
PDZRN3-201ENST00000263666 SPACA1Q9HBV2 294 aa14.33□□□□□ -0.11
PDZRN3-201ENST00000263666 COL4A3Q01955 1670 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 ABCD4O14678 606 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 BPNT1O95861 308 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 TAS2R46P59540 309 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 TNFSF18Q9UNG2 199 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 TRAV14DV4A0A0A6YYC5 116 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 ITGB2P05107 769 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 ZNF728P0DKX0 622 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 OR5H8P0DN80 308 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 FASLGP48023 281 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 AVPI1Q5T686 147 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 KCNS2Q9ULS6 477 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 TUBAL3A6NHL2 446 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 LILRA5A6NI73 299 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 H3BP45 60 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 YKT6O15498 198 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 GDF9O60383 454 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 IFNA2P01563 188 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 CD79AP11912 226 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 KLK2P20151 261 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 RPS10P46783 165 aaKnown RBP14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 KCNJ3P48549 501 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 PDZD11Q5EBL8 140 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 ADIPOR1Q96A54 375 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 UCN2Q96RP3 112 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 GPHA2Q96T91 129 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 ADAM19Q9H013 955 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 LDAHQ9H6V9 325 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 BIN3Q9NQY0 253 aa14.33□□□□□ -0.12
PDZRN3-201ENST00000263666 PADI1Q9ULC6 663 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms