RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CYTL1Q9NRR1 136 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 FAM230AA0A1W2PPH8 454 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 TPPPO94811 219 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 F10P00742 488 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 FOSL2P15408 326 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 CFPP27918 469 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 CD80P33681 288 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 KISS1Q15726 138 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 CHRFAM7AQ494W8 412 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 PHYHD1Q5SRE7 291 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 ZNF574Q6ZN55 896 aaPredicted RBP8.04□□□□□ -1.12
MSH4-201ENST00000263187 CNTNAP3BQ96NU0 1288 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 S100A13Q99584 98 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 CDC6Q99741 560 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 CRB3Q9BUF7 120 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 ZNF160Q9HCG1 818 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 LOC400499M0QZD8 3231 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 ZDBF2Q9HCK1 2354 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 DOCK7Q96N67 2140 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 CCDC163A0A0D9SF12 145 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 SCRG1O75711 98 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 IGHMP01871 453 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 PGA4P0DJD7 388 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 PGA3P0DJD8 388 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 DAOP14920 347 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 MUC1P15941 1255 aaPredicted RBP8.03□□□□□ -1.12
MSH4-201ENST00000263187 NXPH1P58417 271 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 CCDC36Q8IYA8 594 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 SVBPQ8N300 66 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 KCNG3Q8TAE7 436 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 C1orf147Q96MC9 270 aaPredicted RBP8.03□□□□□ -1.12
MSH4-201ENST00000263187 CDX2Q99626 313 aaPredicted RBP8.03□□□□□ -1.12
MSH4-201ENST00000263187 OR10A2Q9H208 303 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 GPR173Q9NS66 373 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 ALKBH4Q9NXW9 302 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 PURGQ9UJV8 347 aaKnown RBP8.03□□□□□ -1.12
MSH4-201ENST00000263187 GPR132Q9UNW8 380 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 DSPP15924 2871 aaKnown RBP8.03□□□□□ -1.12
MSH4-201ENST00000263187 PI4KAP42356 2102 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 TEX13DA0A0J9YY54 714 aaPredicted RBP8.03□□□□□ -1.12
MSH4-201ENST00000263187 TTLL8A6PVC2 850 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 C9JQL5 133 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 XRCC2O43543 280 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 DIRAS3O95661 229 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 HPNP05981 417 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 LPAR6P43657 344 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 FHITP49789 147 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 RIPPLY1Q0D2K3 151 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 UBE2V2Q15819 145 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 TAF9Q16594 264 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 IAH1Q2TAA2 248 aaPredicted RBP8.03□□□□□ -1.12
MSH4-201ENST00000263187 PLPPR5Q32ZL2 321 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 PABPC1L2AQ5JQF8 200 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 PHF19Q5T6S3 580 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 AADACL3Q5VUY0 350 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 Q7L0L9 218 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 NOXO1Q8NFA2 376 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 RNF141Q8WVD5 230 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 ST8SIA1Q92185 356 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 ARL11Q969Q4 196 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 MVB12AQ96EY5 273 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 BSCL2Q96G97 398 aaPredicted RBP8.03□□□□□ -1.12
MSH4-201ENST00000263187 LYZL4Q96KX0 146 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 ZNF385AQ96PM9 386 aaKnown RBP8.03□□□□□ -1.12
MSH4-201ENST00000263187 GPHA2Q96T91 129 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 MRPL13Q9BYD1 178 aaKnown RBP8.03□□□□□ -1.12
MSH4-201ENST00000263187 SLC2A8Q9NY64 477 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 PIGLQ9Y2B2 252 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 B3GALT5Q9Y2C3 310 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 NCOR1O75376 2440 aa8.03□□□□□ -1.12
MSH4-201ENST00000263187 A0A0A6YYH2 397 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 A6NJ64 397 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 DHRS7CA6NNS2 312 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 SIGLEC6O43699 453 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 TRAF3IP2O43734 574 aaPredicted RBP8.02□□□□□ -1.12
MSH4-201ENST00000263187 SNAPC5O75971 98 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 SFT2D2O95562 160 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 TMEM225BP0DP42 221 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 PCK2Q16822 640 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 THEM4Q5T1C6 240 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 GUSBP11Q6P575 273 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 PLXDC2Q6UX71 529 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 UQCC2Q9BRT2 126 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 ZNF2Q9BSG1 426 aaPredicted RBP8.02□□□□□ -1.12
MSH4-201ENST00000263187 FAAP24Q9BTP7 215 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 RHOFQ9HBH0 211 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 MCTS1Q9ULC4 181 aaKnown RBP8.02□□□□□ -1.12
MSH4-201ENST00000263187 B3GALT1Q9Y5Z6 326 aa8.02□□□□□ -1.12
MSH4-201ENST00000263187 C1QL1O75973 258 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 GUCA1AP43080 201 aaPredicted RBP8.02□□□□□ -1.13
MSH4-201ENST00000263187 P2RY4P51582 365 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 PDZK1IP1Q13113 114 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 PHLDA2Q53GA4 152 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 RAET1LQ5VY80 246 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 LINC00518Q8N0U6 118 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 UQCC1Q9NVA1 299 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 PLEKHJ1Q9NW61 149 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 NXT1Q9UKK6 140 aaKnown RBP8.02□□□□□ -1.13
MSH4-201ENST00000263187 RFNGQ9Y644 331 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 COL4A2P08572 1712 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms