RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 TMEM138Q9NPI0 162 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 NOSIPQ9Y314 301 aaKnown RBP11.89□□□□□ -0.51
VMP1-201ENST00000262291 MUC6Q6W4X9 2439 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 WIPF3A6NGB9 483 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 RBBP9O75884 186 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 CSN2P05814 226 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 GTF2F2P13984 249 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 ANXA7P20073 488 aaKnown RBP11.89□□□□□ -0.51
VMP1-201ENST00000262291 CCL11P51671 97 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 TCF15Q12870 199 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 ELFN2Q5R3F8 820 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 AWAT2Q6E213 333 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 SLC16A13Q7RTY0 426 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 TUSC5Q8IXB3 177 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 ZNF101Q8IZC7 436 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 OR5AS1Q8N127 324 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 NAXEQ8NCW5 288 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 OR56B4Q8NH76 319 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 MGAT4CQ9UBM8 478 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 M0R135 149 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 SP1P08047 785 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 ZNF32P17041 273 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 PRSS3P35030 304 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 ZNF93P35789 620 aaPredicted RBP11.88□□□□□ -0.51
VMP1-201ENST00000262291 MNDAP41218 407 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 RAD52P43351 418 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 CLDN18P56856 261 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 PPIAP62937 165 aaKnown RBP11.88□□□□□ -0.51
VMP1-201ENST00000262291 GRB2P62993 217 aaKnown RBP11.88□□□□□ -0.51
VMP1-201ENST00000262291 S100A12P80511 92 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 DYRK1AQ13627 763 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 PABPC1L2AQ5JQF8 200 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 RNFT1Q5M7Z0 435 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 TSPO2Q5TGU0 170 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 HACD4Q5VWC8 232 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 ABLIM2Q6H8Q1 611 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 SLC25A25Q6KCM7 469 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 LYPD6Q86Y78 171 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 PAQR4Q8N4S7 273 aaPredicted RBP11.88□□□□□ -0.51
VMP1-201ENST00000262291 OR4C16Q8NGL9 310 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 WNT2BQ93097 391 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 ZNF799Q96GE5 643 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 NICN1Q9BSH3 213 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 SF3B5Q9BWJ5 86 aaKnown RBP11.88□□□□□ -0.51
VMP1-201ENST00000262291 EXO5Q9H790 373 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 B4GALT7Q9UBV7 327 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 IGKV1-9A0A0C4DH69 117 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 MEGF11A6BM72 1044 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 M0QYG6 137 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 ABCD4O14678 606 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 SULT1B1O43704 296 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 WISP2O76076 250 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 SPDEFO95238 335 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 CD3DP04234 171 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 NFYAP23511 347 aaPredicted RBP11.88□□□□□ -0.51
VMP1-201ENST00000262291 KCNJ3P48549 501 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 ARG2P78540 354 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 HLXQ14774 488 aaPredicted RBP11.88□□□□□ -0.51
VMP1-201ENST00000262291 SLC22A6Q4U2R8 563 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 BTN2A1Q7KYR7 527 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 CCDC36Q8IYA8 594 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 TMEM104Q8NE00 496 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 FER1L6-AS2Q96M78 137 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 GPER1Q99527 375 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 CMSS1Q9BQ75 279 aaKnown RBP11.88□□□□□ -0.51
VMP1-201ENST00000262291 NKX6-2Q9C056 277 aaPredicted RBP11.88□□□□□ -0.51
VMP1-201ENST00000262291 ARL6Q9H0F7 186 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 TMEM38BQ9NVV0 291 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 CEP250Q9BV73 2442 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 AKAP13Q12802 2813 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 SGCEO43556 437 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 SSX5O60225 188 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 VSIG8P0DPA2 414 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 NR2C1P13056 603 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 PSMB1P20618 241 aaKnown RBP11.88□□□□□ -0.51
VMP1-201ENST00000262291 FGL1Q08830 312 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 C1orf100Q5SVJ3 147 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 GLIPR1L1Q6UWM5 242 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 OR4S1Q8NGB4 309 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 OR10K1Q8NGX5 313 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 PIGTQ969N2 578 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 PRRG4Q9BZD6 226 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 GPR35Q9HC97 309 aa11.88□□□□□ -0.51
VMP1-201ENST00000262291 PURGQ9UJV8 347 aaKnown RBP11.88□□□□□ -0.51
VMP1-201ENST00000262291 PLSCR5A0PG75 271 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 TUBAL3A6NHL2 446 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 H7C417 338 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 FABP1P07148 127 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 RAB13P51153 203 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 MRPS34P82930 218 aaKnown RBP11.87□□□□□ -0.51
VMP1-201ENST00000262291 HFEQ30201 348 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 FAM74A1Q5RGS3 127 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 OLFML2AQ68BL7 652 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 FGD2Q7Z6J4 655 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 CBLN2Q8IUK8 224 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 SKA3Q8IX90 412 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 SLC22A24Q8N4F4 322 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 OR52B4Q8NGK2 314 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 OR14K1Q8NGZ2 314 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms