RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 PGA5P0DJD9 388 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 HIST1H1CP16403 213 aaKnown RBP7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 CHRNB4P30926 498 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 GZMMP51124 257 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 ISXQ2M1V0 245 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 ZNF684Q5T5D7 378 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 ZNF776Q68DI1 518 aaPredicted RBP7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 ZNF813Q6ZN06 617 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 OR4S1Q8NGB4 309 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 OR11G2Q8NGC1 345 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 NANOS1Q8WY41 292 aaKnown RBP7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 ARRDC3Q96B67 414 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 APH1AQ96BI3 265 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 FOXN4Q96NZ1 517 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 ADM5C9JUS6 153 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 SIRPB1O00241 398 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 PEX12O00623 359 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 OR7C2O60412 319 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 EIF4E2O60573 245 aaKnown RBP7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 HOXA11P31270 313 aaPredicted RBP7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 ELLP55199 621 aaPredicted RBP7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 CASP6P55212 293 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 WNT3P56703 355 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 SEMG2Q02383 582 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 IKZF1Q13422 519 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 PRRT3Q5FWE3 981 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 PSMG4Q5JS54 123 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 EOGTQ5NDL2 527 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 FIGLAQ6QHK4 219 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 ALKAL1Q6UXT8 129 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 TCTN2Q96GX1 697 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 FAAP24Q9BTP7 215 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 LYRM4Q9HD34 91 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 PSENENQ9NZ42 101 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 CGGBP1Q9UFW8 167 aaPredicted RBP7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 CITO14578 2027 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 MARCH11A6NNE9 402 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 GEMIN2O14893 280 aaKnown RBP7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 CST5P28325 142 aaPredicted RBP7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 HOXD9P28356 352 aaPredicted RBP7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 GAMTQ14353 236 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 TGIF2LYQ8IUE0 185 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 ZNF595Q8IYB9 648 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 ZNRF4Q8WWF5 429 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 PELI1Q96FA3 418 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 SLC35A4Q96G79 324 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 PKIBQ9C010 78 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 NAA60Q9H7X0 242 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 SRD5A3Q9H8P0 318 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 NAT8BQ9UHF3 227 aa7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 C19orf53Q9UNZ5 99 aaPredicted RBP7.51□□□□□ -1.21
SNCAIP-201ENST00000261367 TNFRSF10CO14798 259 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 PITX3O75364 302 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 SLC2A10O95528 541 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 NPBWR2P48146 333 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 RPS21P63220 83 aaKnown RBP7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 TAS1R1Q7RTX1 841 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 TRIB1Q96RU8 372 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 CHST11Q9NPF2 352 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 MRPS17Q9Y2R5 130 aaKnown RBP7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 TMED7Q9Y3B3 224 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 ZSWIM8A7E2V4 1837 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 SQSTM1Q13501 440 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 ZNF385BQ569K4 471 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 LHFPL2Q6ZUX7 228 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 CARFQ8N187 725 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 ZNF511Q8NB15 262 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 PFN4Q8NHR9 129 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 GALNT14Q96FL9 552 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 UTP23Q9BRU9 249 aaKnown RBP7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 RSG1Q9BU20 258 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 PEF1Q9UBV8 284 aaKnown RBP7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 HSPB8Q9UJY1 196 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 NXT1Q9UKK6 140 aaKnown RBP7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 PPP1R3CQ9UQK1 317 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 MCM3APO60318 1980 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 KIAA1324LA8MWY0 1029 aaPredicted RBP7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 CDS2O95674 445 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 TTRP02766 147 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 OR5G3P0C626 314 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 CCNOP22674 350 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 CTSOP43234 321 aaPredicted RBP7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 PLP1P60201 277 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 DGAT2L6Q6ZPD8 337 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 CTU1Q7Z7A3 348 aaKnown RBP7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 BPIFA4PQ86YQ2 179 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 MIEN1Q9BRT3 115 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 ADAMTS5Q9UNA0 930 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 ANKRD30BLA7E2S9 258 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 ZBTB42B2RXF5 422 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 LCATP04180 440 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 GLB1P16278 677 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 HIST1H1DP16402 221 aaKnown RBP7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 UBE2G1P62253 170 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 ZNF117Q03924 483 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 ELAVL3Q14576 367 aaKnown RBP7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 PHLDA2Q53GA4 152 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 MORN1Q5T089 497 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 DMRTA1Q5VZB9 504 aa7.5□□□□□ -1.21
SNCAIP-201ENST00000261367 PLCXD3Q63HM9 321 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms