RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ARRDC5A6NEK1 342 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 EPXP11678 715 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 LINC00303Q3SY05 128 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 ZNF793Q6ZN11 406 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 ARHGEF39Q8N4T4 335 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 RTN4IP1Q8WWV3 396 aaPredicted RBP10.86□□□□□ -0.67
COL8A1-201ENST00000261037 PELI1Q96FA3 418 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 DBX1A6NMT0 343 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 LMO7DNF2Z398 122 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 SCO1O75880 301 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 SP6Q3SY56 376 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 ANKRD37Q7Z713 158 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 SLC24A4Q8NFF2 622 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 EXTL1Q92935 676 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 VN1R1Q9GZP7 353 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 R4GN57 208 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 ADAM10O14672 748 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 AQP6Q13520 282 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 OR2T2Q6IF00 324 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 SSX7Q7RTT5 188 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 C17orf78Q8N4C9 275 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 CLDN23Q96B33 292 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 ZPBPQ9BS86 351 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 FGF20Q9NP95 211 aaPredicted RBP10.85□□□□□ -0.67
COL8A1-201ENST00000261037 MYO9BQ13459 2157 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 NDUFB3O43676 98 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 CA6P23280 308 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 THBS4P35443 961 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 MISP3Q96FF7 219 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 OR8B4Q96RC9 309 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 C20orf141Q9NUB4 165 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 DOCK1Q14185 1865 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 CDK5RAP2Q96SN8 1893 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 G3V3Q6 166 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 PRSS12P56730 875 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 LRRC10Q5BKY1 277 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 UBE3DQ7Z6J8 389 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 PPP1R1CQ8WVI7 109 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 SMIM7Q9BQ49 75 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 PRDM7Q9NQW5 492 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 IGHV3-43A0A0B4J1X8 118 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 ASPDHA6ND91 283 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 ZNF785A8K8V0 405 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 M0R1X1 148 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 CST7O76096 145 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 IGHV3-43DP0DP04 118 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 GLULP15104 373 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 COX5AP20674 150 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 NKG7Q16617 165 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 TIGITQ495A1 244 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 Q56UQ5 140 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 YBX2Q9Y2T7 364 aaKnown RBP10.85□□□□□ -0.67
COL8A1-201ENST00000261037 UBR3Q6ZT12 1888 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 TMEM272A0A1B0GTI8 110 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 LILRA5A6NI73 299 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 COL9A1P20849 921 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 ZBTB25P24278 435 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 CEACAM6P40199 344 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 PPP1CAP62136 330 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 OXA1LQ15070 435 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 SFTPA1Q8IWL2 248 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 FBXL14Q8N1E6 418 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 OTOSQ8NHW6 89 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 WDR89Q96FK6 387 aaPredicted RBP10.85□□□□□ -0.67
COL8A1-201ENST00000261037 ADGRL4Q9HBW9 690 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 PLSCR3Q9NRY6 295 aa10.85□□□□□ -0.67
COL8A1-201ENST00000261037 TCAPO15273 167 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 ZNF17P17021 662 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 SRSF5Q13243 272 aaKnown RBP10.84□□□□□ -0.67
COL8A1-201ENST00000261037 APOBEC3DQ96AK3 386 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-201ENST00000261037 CLEC5AQ9NY25 188 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 PYCARD-AS1I3L0S3 204 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 IGHV3-13P01766 116 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 IGHV3-7P01780 117 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 MPGP29372 298 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 SIGLECL1Q8N7X8 197 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 ADGRG7Q96K78 797 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 DHRS9Q9BPW9 319 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 NIT2Q9NQR4 276 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 SCN9AQ15858 1988 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 RER1O15258 196 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 FABP9Q0Z7S8 132 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 ZNF774Q6NX45 483 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 LRRTM1Q86UE6 522 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 DND1Q8IYX4 353 aaKnown RBP10.84□□□□□ -0.67
COL8A1-201ENST00000261037 ZBTB44Q8NCP5 570 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 SIRT5Q9NXA8 310 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 A0A1B0GUH1 482 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 AVPR2P30518 371 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 FZD5Q13467 585 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 ZNF528Q3MIS6 628 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 MRGPREQ86SM8 312 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 TSPAN32Q96QS1 320 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 NRTNQ99748 197 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 ZNF251Q9BRH9 671 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 DUSP21Q9H596 190 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 FOXJ3Q9UPW0 622 aa10.84□□□□□ -0.67
COL8A1-201ENST00000261037 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.84□□□□□ -0.67
COL8A1-201ENST00000261037 A0A1B0GTH9 108 aa10.83□□□□□ -0.67
COL8A1-201ENST00000261037 TMEM30CPA0ZSE6 113 aa10.83□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms