RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 FOXRED1Q96CU9 486 aaPredicted RBP15.07■□□□□ 0
SRSF1-201ENST00000258962 METTL17Q9H7H0 456 aaPredicted RBP15.07■□□□□ 0
SRSF1-201ENST00000258962 TBC1D24Q9ULP9 559 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 PIGLQ9Y2B2 252 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 LOC100289279A0A1B0GTE1 492 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 CIB4A0PJX0 185 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 DHRS7CA6NNS2 312 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 TPPPO94811 219 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 CCNOP22674 350 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 EFNB2P52799 333 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 ZNF92Q03936 586 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 ASAH1Q13510 395 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 C2orf76Q3KRA6 126 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 MZT2BQ6NZ67 158 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 BIVMQ86UB2 503 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 IZUMO1Q8IYV9 350 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 C1orf162Q8NEQ5 155 aaPredicted RBP15.07■□□□□ 0
SRSF1-201ENST00000258962 SEMA6DQ8NFY4 1073 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 RAB40AQ8WXH6 277 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 SPSB4Q96A44 273 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 C10orf35Q96D05 121 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 ABHD1Q96SE0 405 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 CHST5Q9GZS9 411 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 RGCCQ9H4X1 137 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 CNTD2Q9H8S5 307 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 RHBDL2Q9NX52 303 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 KCNN3Q9UGI6 736 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 ZNF391Q9UJN7 358 aa15.07■□□□□ 0
SRSF1-201ENST00000258962 UNC79Q9P2D8 2635 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 TMEM272A0A1B0GTI8 110 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 A0A1W2PR80 420 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 LDLRAD4O15165 306 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 XRCC2O43543 280 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 SERPINA5P05154 406 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 ART1P52961 327 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 FAM3AP98173 230 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 SORDQ00796 357 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 SNTB1Q13884 538 aaKnown RBP15.06■□□□□ 0
SRSF1-201ENST00000258962 UBE2V2Q15819 145 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 UTS2BQ765I0 119 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 MYPOPQ86VE0 399 aaPredicted RBP15.06■□□□□ 0
SRSF1-201ENST00000258962 CXorf67Q86X51 503 aaPredicted RBP15.06■□□□□ 0
SRSF1-201ENST00000258962 CCDC36Q8IYA8 594 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 PAQR4Q8N4S7 273 aaPredicted RBP15.06■□□□□ 0
SRSF1-201ENST00000258962 PP6455Q8WZ26 134 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 HAVCR1Q96D42 359 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 SORCS2Q96PQ0 1159 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 SPACA5Q96QH8 159 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 SLC22A4Q9H015 551 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 ELOVL5Q9NYP7 299 aa15.06■□□□□ 0
SRSF1-201ENST00000258962 TUBAL3A6NHL2 446 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 HLA-DQB1P01920 261 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 ALDOBP05062 364 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 ERCC1P07992 297 aaPredicted RBP15.05■□□□□ -0
SRSF1-201ENST00000258962 PRF1P14222 555 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 ZNF14P17017 642 aaPredicted RBP15.05■□□□□ -0
SRSF1-201ENST00000258962 SSTR2P30874 369 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 APLNRP35414 380 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 GSK3AP49840 483 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 BCAP31P51572 246 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 UBE2NP61088 152 aaKnown RBP15.05■□□□□ -0
SRSF1-201ENST00000258962 OR8B8Q15620 311 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 DMRTC1Q5HYR2 192 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 CRIP3Q6Q6R5 217 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 WDR31Q8NA23 367 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 AKAP1Q92667 903 aaKnown RBP eCLIP15.05■□□□□ -0
SRSF1-201ENST00000258962 S100A16Q96FQ6 103 aaKnown RBP15.05■□□□□ -0
SRSF1-201ENST00000258962 UQCC2Q9BRT2 126 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 NOTCH2Q04721 2471 aa15.05■□□□□ -0
SRSF1-201ENST00000258962 FUOMA2VDF0 154 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 ALX3O95076 343 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 CELA3BP08861 270 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 HOXB1P14653 301 aaPredicted RBP15.04■□□□□ -0
SRSF1-201ENST00000258962 ZNF93P35789 620 aaPredicted RBP15.04■□□□□ -0
SRSF1-201ENST00000258962 WNT5AP41221 380 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 MAP2K3P46734 347 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 RIPPLY1Q0D2K3 151 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 TAB1Q15750 504 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 ZNF474Q6S9Z5 364 aaPredicted RBP15.04■□□□□ -0
SRSF1-201ENST00000258962 BEND4Q6ZU67 534 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 CDH26Q8IXH8 852 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 ZNF295-AS1Q8N0V1 137 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 SLC30A7Q8NEW0 376 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 APOBEC3DQ96AK3 386 aaPredicted RBP15.04■□□□□ -0
SRSF1-201ENST00000258962 NDRG3Q9UGV2 375 aa15.04■□□□□ -0
SRSF1-201ENST00000258962 MAGEB3O15480 346 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 NGFP01138 241 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 ARSBP15848 533 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 CDK2P24941 298 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 FAM27E3Q08E93 113 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 FAM222BQ8WU58 562 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 TRIM63Q969Q1 353 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 C14orf79Q96F83 325 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 POFUT1Q9H488 388 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 GPR173Q9NS66 373 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 STARD10Q9Y365 291 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 ADGRG4Q8IZF6 3080 aa15.03■□□□□ -0
SRSF1-201ENST00000258962 C16orf97H3BN30 126 aa15.02■□□□□ -0
SRSF1-201ENST00000258962 LANCL1O43813 399 aa15.02■□□□□ -0
SRSF1-201ENST00000258962 SSX4O60224 188 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms