RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 RNF133Q8WVZ7 376 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 PIK3IP1Q96FE7 263 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 C2orf50Q96LR7 162 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 DMRTA2Q96SC8 542 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 HDHD3Q9BSH5 251 aaPredicted RBP4.2□□□□□ -1.74
USP44-201ENST00000258499 REG4Q9BYZ8 158 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 OR51B6Q9H340 312 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 SLC7A11Q9UPY5 501 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 LRRK1Q38SD2 2015 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 TPRP12270 2363 aaKnown RBP4.2□□□□□ -1.74
USP44-201ENST00000258499 RNF222A6NCQ9 220 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 OR5H15A6NDH6 313 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 MSGN1A6NI15 193 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 MS4A18H0YCH9 400 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 H3BMH7 237 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 M0R135 149 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 TO15178 435 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 PHF1O43189 567 aaPredicted RBP4.2□□□□□ -1.74
USP44-201ENST00000258499 SIGLEC6O43699 453 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 RBMXL2O75526 392 aaKnown RBP4.2□□□□□ -1.74
USP44-201ENST00000258499 PIAS2O75928 621 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 OR5H8P0DN80 308 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 SPINK2P20155 84 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 EPHA1P21709 976 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 HTR5AP47898 357 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 ID4P47928 161 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 RRADP55042 308 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 GPR85P60893 370 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 UNC119Q13432 240 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 MS4A18Q3C1V0 323 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 ALKBH2Q6NS38 261 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 GPR179Q6PRD1 2367 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 DEGS2Q6QHC5 323 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 ARRDC1Q8N5I2 433 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 TMEM217Q8N7C4 229 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 NOXO1Q8NFA2 376 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 GJC3Q8NFK1 279 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 SEMA6DQ8NFY4 1073 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 ZNF799Q96GE5 643 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 UQCC2Q9BRT2 126 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 TLNRD1Q9H1K6 362 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 G6PC2Q9NQR9 355 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 PADI1Q9ULC6 663 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 DNAH14Q0VDD8 3507 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 PHF3Q92576 2039 aaKnown RBP4.2□□□□□ -1.74
USP44-201ENST00000258499 LIPT2A6NK58 231 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 ADAM10O14672 748 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 SFT2D2O95562 160 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 SFTA3P0C7M3 94 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 JMJD7P0C870 316 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 ZNF728P0DKX0 622 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 DAOP14920 347 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 PNLIPP16233 465 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 GLB1P16278 677 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 TBPP20226 339 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 MSR1P21757 451 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 OTX2P32243 289 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 PTGFRP43088 359 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 KCNJ3P48549 501 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 AFF3P51826 1226 aaKnown RBP4.2□□□□□ -1.74
USP44-201ENST00000258499 PIGPP57054 158 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 PJVKQ0ZLH3 352 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 FNDC7Q5VTL7 733 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 ZNF529Q6P280 563 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 PRR18Q8N4B5 295 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 OR52H1Q8NGJ2 320 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 RPS4Y2Q8TD47 263 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 SECTM1Q8WVN6 248 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 LIPHQ8WWY8 451 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 ASB13Q8WXK3 278 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 ISOC2Q96AB3 205 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 PHYHIPLQ96FC7 376 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 REEP6Q96HR9 211 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 METTL9Q9H1A3 318 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 LPAR5Q9H1C0 372 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 SPACA1Q9HBV2 294 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 FAM212BQ9NTI7 297 aaPredicted RBP4.2□□□□□ -1.74
USP44-201ENST00000258499 ZFP57Q9NU63 452 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 UQCC1Q9NVA1 299 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 DOCK8Q8NF50 2099 aa4.2□□□□□ -1.74
USP44-201ENST00000258499 RNASEK-C17orf49H0YIS7 233 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 HSPA12AO43301 675 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 MBTPS2O43462 519 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 TPPPO94811 219 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 RD3LP0DJH9 198 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 FSTP19883 344 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 NPBWR1P48145 328 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 DHODHQ02127 395 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 IKZF1Q13422 519 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 ARL6IP1Q15041 203 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 CSRP2Q16527 193 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.19□□□□□ -1.74
USP44-201ENST00000258499 PLCXD3Q63HM9 321 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 ZNF813Q6ZN06 617 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 MOB3CQ70IA8 216 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 RNF144BQ7Z419 303 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 YRDCQ86U90 279 aaKnown RBP4.19□□□□□ -1.74
USP44-201ENST00000258499 ZSCAN4Q8NAM6 433 aaPredicted RBP4.19□□□□□ -1.74
USP44-201ENST00000258499 OR9K2Q8NGE7 335 aa4.19□□□□□ -1.74
USP44-201ENST00000258499 ST7LQ8TDW4 575 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms