RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 KCNG3Q8TAE7 436 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 MAL2Q969L2 176 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 TSPAN32Q96QS1 320 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 GABARAPL3Q9BY60 117 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 MAGEH1Q9H213 219 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 PSG11Q9UQ72 335 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM189A5PLL7 270 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 PYCARD-AS1I3L0S3 204 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 WNT1P04628 370 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 BCHEP06276 602 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC25A4P12235 298 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 BCL6P41182 706 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 VIPR2P41587 438 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 SRPXP78539 464 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF343Q6P1L6 599 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 LGI3Q8N145 548 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 THAP4Q8WY91 577 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 DAZAP1Q96EP5 407 aaKnown RBP6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 OR6C1Q96RD1 312 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF587Q96SQ5 575 aaPredicted RBP6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 MRPL13Q9BYD1 178 aaKnown RBP6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 B3GAT2Q9NPZ5 323 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 CD207Q9UJ71 328 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 POLR1DQ9Y2S0 133 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 DNAJC15Q9Y5T4 150 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 ENPP4Q9Y6X5 453 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 TAF1P21675 1872 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 IFITM10A6NMD0 228 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 RNASET2O00584 256 aaKnown RBP6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 CCL2P13500 99 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC37A1P57057 533 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 TBPL1P62380 186 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC25A11Q02978 314 aaKnown RBP6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 MFGE8Q08431 387 aaPredicted RBP6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 IL10RAQ13651 578 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 HLA-DRB5Q30154 266 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 HSF5Q4G112 596 aaPredicted RBP6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 CPEB2Q7Z5Q1 589 aaKnown RBP6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM173Q86WV6 379 aaPredicted RBP6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 SULF2Q8IWU5 870 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 PNKDQ8N490 385 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 GBGT1Q8N5D6 347 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 OR10G6Q8NH81 332 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 UBE2FQ969M7 185 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC17A9Q9BYT1 436 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 CLCF1Q9UBD9 225 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 H3BMH7 237 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 TAPBPO15533 448 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 SLC6A9P48067 706 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 RBX1P62877 108 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 HSD52Q0P140 79 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 ST3GAL3Q11203 375 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 SSX1Q16384 188 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 PLPP4Q5VZY2 271 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 ASTLQ6HA08 431 aaPredicted RBP6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 UNQ5815/PRO19632Q6UWF5 114 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 ACVR1CQ8NER5 493 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 OVCA2Q8WZ82 227 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 MARS2Q96GW9 593 aaKnown RBP6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 PMCHL2Q9BQD1 86 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 MS4A8Q9BY19 250 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 RAB1BQ9H0U4 201 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 SPANXCQ9NY87 97 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 MBLAC1A4D2B0 266 aaPredicted RBP6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 KLRC4-KLRK1H3BQV0 150 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 EDIL3O43854 480 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 DDAH2O95865 285 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 CFHP08603 1231 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 FURINP09958 794 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 APLNRP35414 380 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 HSD11B2P80365 405 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 IL10RBQ08334 325 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 TESK1Q15569 626 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 ALKBH6Q3KRA9 238 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 PRRT3Q5FWE3 981 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 TECRLQ5HYJ1 363 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 LYG2Q86SG7 212 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 PELI3Q8N2H9 469 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 RBMXL3Q8N7X1 1067 aaKnown RBP6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF417Q8TAU3 575 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 CLEC4CQ8WTT0 213 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 RBKSQ9H477 322 aa6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 UBE2ZQ9H832 354 aaPredicted RBP6.09□□□□□ -1.44
PDGFRA-201ENST00000257290 TRBV7-9A0A0J9YWB2 115 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 C7orf71A4D174 169 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 GRXCR1A8MXD5 290 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEM262E9PQX1 116 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST1H2BKO60814 126 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST1H2BJP06899 126 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF28P17035 718 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST1H2BOP23527 126 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST1H2BBP33778 126 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 WNT3AP56704 352 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST1H2BDP58876 126 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST1H2BCP62807 126 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST2H2BEQ16778 126 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 FBXW9Q5XUX1 488 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEM225Q6GV28 225 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 MMP21Q8N119 569 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms