RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ECDO95905 644 aaPredicted RBP16.39■□□□□ 0.21
TRIM47-201ENST00000254816 ANXA3P12429 323 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 SCAND1P57086 179 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 OR2A2Q6IF42 318 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 Q6ZSR3 168 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 MDP1Q86V88 176 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 HYLS1Q96M11 299 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 C1QTNF5Q9BXJ0 243 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 RABL2AQ9UBK7 228 aaPredicted RBP16.39■□□□□ 0.21
TRIM47-201ENST00000254816 RABL2BQ9UNT1 228 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 FAM215AQ9Y5M1 114 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 ANKRD20A5PA0PJZ0 165 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 PEX14O75381 377 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 CTAG2O75638 210 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 THBS4P35443 961 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 Q6ZT83 130 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 SEMA6DQ8NFY4 1073 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 OR11H4Q8NGC9 324 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 OR6K3Q8NGY3 331 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 GRPEL2Q8TAA5 225 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 MGAT4AQ9UM21 535 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 ZGRF1Q86YA3 2104 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 ANKRD34BA5PLL1 514 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 MBD3L4A6NDZ8 208 aaPredicted RBP16.38■□□□□ 0.21
TRIM47-201ENST00000254816 MBD3L3A6NE82 208 aaPredicted RBP16.38■□□□□ 0.21
TRIM47-201ENST00000254816 MBD3L5A6NJ08 208 aaPredicted RBP16.38■□□□□ 0.21
TRIM47-201ENST00000254816 ARPC1BO15143 372 aaKnown RBP16.38■□□□□ 0.21
TRIM47-201ENST00000254816 TNFSF13O75888 250 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 PSMB1P20618 241 aaKnown RBP16.38■□□□□ 0.21
TRIM47-201ENST00000254816 AP3S2P59780 193 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 ZNF324BQ6AW86 544 aaPredicted RBP16.38■□□□□ 0.21
TRIM47-201ENST00000254816 MBD3L2Q8NHZ7 208 aaPredicted RBP16.38■□□□□ 0.21
TRIM47-201ENST00000254816 TRAF4Q9BUZ4 470 aaPredicted RBP16.38■□□□□ 0.21
TRIM47-201ENST00000254816 ATG5Q9H1Y0 275 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 GPR173Q9NS66 373 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 ING4Q9UNL4 249 aa16.38■□□□□ 0.21
TRIM47-201ENST00000254816 CIB4A0PJX0 185 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 FCER2P06734 321 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 ERCC1P07992 297 aaPredicted RBP16.37■□□□□ 0.21
TRIM47-201ENST00000254816 HTR2BP41595 481 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 OR3A4PP47883 348 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 FAM3AP98173 230 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 PLP2Q04941 152 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 KRTCAP3Q53RY4 240 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 ANGPTL5Q86XS5 388 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 NAXEQ8NCW5 288 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 POM121L2Q96KW2 1035 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 ACTR6Q9GZN1 396 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 CHST5Q9GZS9 411 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 OPN3Q9H1Y3 402 aaPredicted RBP16.37■□□□□ 0.21
TRIM47-201ENST00000254816 ATPIF1Q9UII2 106 aa16.37■□□□□ 0.21
TRIM47-201ENST00000254816 C1QTNF9BB2RNN3 333 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 C1QTNF9P0C862 333 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 COX5BP10606 129 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 GSK3AP49840 483 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 RAG2P55895 527 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 ZP1P60852 638 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 LINC00303Q3SY05 128 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 PRR30Q53SZ7 412 aaPredicted RBP16.36■□□□□ 0.21
TRIM47-201ENST00000254816 AWAT2Q6E213 333 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 Q6ZTK2 550 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 PAQR4Q8N4S7 273 aaPredicted RBP16.36■□□□□ 0.21
TRIM47-201ENST00000254816 ZNF610Q8N9Z0 462 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 ZNF431Q8TF32 576 aaPredicted RBP16.36■□□□□ 0.21
TRIM47-201ENST00000254816 SNAPC3Q92966 411 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 PIGTQ969N2 578 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 FAM46BQ96A09 425 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 STARD4Q96DR4 205 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 SLC23A1Q9UHI7 598 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 LDLRAD4O15165 306 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 ALDOBP05062 364 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 SULT1A3P0DMM9 295 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 SULT1A4P0DMN0 295 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 GUCA2AQ02747 115 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 GABRA6Q16445 453 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 C1orf185Q5T7R7 199 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 COLCA1Q6ZS62 124 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 MYPOPQ86VE0 399 aaPredicted RBP16.36■□□□□ 0.21
TRIM47-201ENST00000254816 OR5D18Q8NGL1 313 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 NANOS1Q8WY41 292 aaKnown RBP16.36■□□□□ 0.21
TRIM47-201ENST00000254816 PP6455Q8WZ26 134 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 GPER1Q99527 375 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 SEC22CQ9BRL7 303 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 UQCC2Q9BRT2 126 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 OR51B6Q9H340 312 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 PLSCR4Q9NRQ2 329 aa16.36■□□□□ 0.21
TRIM47-201ENST00000254816 hCG_38984A0A1B0GV85 526 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 MEIS3P1A6NDR6 274 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 XRCC3O43542 346 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 WDR1O75083 606 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 NGFP01138 241 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 CELA3BP08861 270 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 GABRA1P14867 456 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 RAD52P43351 418 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 ID4P47928 161 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 TDGF1P3P51864 188 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 UCNP55089 124 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 TGFBR3Q03167 851 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 RIPPLY1Q0D2K3 151 aa16.35■□□□□ 0.21
TRIM47-201ENST00000254816 CRIP3Q6Q6R5 217 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms