RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 OR5H1A6NKK0 313 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 MT-ND4LP03901 98 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 PPP1CBP62140 327 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 IGFBP7Q16270 282 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 SH2D5Q6ZV89 423 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 KPTNQ9Y664 436 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 KIAA1217Q5T5P2 1943 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 AQP7P3A6NL99 342 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF354AO60765 605 aaPredicted RBP7.8□□□□□ -1.16
PTCD3-201ENST00000254630 OR2C1O95371 312 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 LALBAP00709 142 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 OR5H8P0DN80 308 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 OR5I1Q13606 314 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 WDR74Q6RFH5 385 aaPredicted RBP7.8□□□□□ -1.16
PTCD3-201ENST00000254630 ACOT7LQ6ZUV0 252 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 BHLHA9Q7RTU4 235 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 OR2I1PQ8NGU4 316 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 EXTL1Q92935 676 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 OR8B4Q96RC9 309 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 CXXC4Q9H2H0 198 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 EXOGQ9Y2C4 368 aaKnown RBP7.8□□□□□ -1.16
PTCD3-201ENST00000254630 XKRY2A2RUG3 117 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 TBX19O60806 448 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 CA6P23280 308 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 PRDX4Q13162 271 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 HFEQ30201 348 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 PWWP2BQ6NUJ5 590 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 TRAT1Q6PIZ9 186 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 C17orf107Q6ZR85 190 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 AMER3Q8N944 861 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 OR52N4Q8NGI2 321 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 ORAI1Q96D31 301 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 NKX6-2Q9C056 277 aaPredicted RBP7.8□□□□□ -1.16
PTCD3-201ENST00000254630 SLC25A32Q9H2D1 315 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 MMP25Q9NPA2 562 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 PLPP3O14495 311 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 CDX4O14627 284 aaPredicted RBP7.8□□□□□ -1.16
PTCD3-201ENST00000254630 TOX3O15405 576 aaPredicted RBP7.8□□□□□ -1.16
PTCD3-201ENST00000254630 GUCA2AQ02747 115 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 TOMM34Q15785 309 aaPredicted RBP7.8□□□□□ -1.16
PTCD3-201ENST00000254630 PLA1AQ53H76 456 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 Q7L0L9 218 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 OR4S1Q8NGB4 309 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 WDR34Q96EX3 536 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 PLEKHA2Q9HB19 425 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF785A8K8V0 405 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 OR7C2O60412 319 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 C1QBP02746 253 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 PRR35P0CG20 571 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 CEACAM6P40199 344 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 UBE2MP61081 183 aaKnown RBP7.8□□□□□ -1.16
PTCD3-201ENST00000254630 TNFAIP6P98066 277 aaPredicted RBP7.8□□□□□ -1.16
PTCD3-201ENST00000254630 PHYHD1Q5SRE7 291 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 RPUSD3Q6P087 351 aaKnown RBP7.8□□□□□ -1.16
PTCD3-201ENST00000254630 HES4Q9HCC6 221 aa7.8□□□□□ -1.16
PTCD3-201ENST00000254630 A0A1B0GUH1 482 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 SERPINE3A8MV23 424 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 DCTN6O00399 190 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 TMEM127O75204 238 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 PI3P19957 117 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 SRP14P37108 136 aaKnown RBP7.79□□□□□ -1.16
PTCD3-201ENST00000254630 PPP1CAP62136 330 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 GNG3P63215 75 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 FMODQ06828 376 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 TMEM267Q0VDI3 215 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-201ENST00000254630 SPINK14Q6IE38 97 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF774Q6NX45 483 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 PP6455Q8WZ26 134 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 MISP3Q96FF7 219 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF251Q9BRH9 671 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 PIGMQ9H3S5 423 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 BRWD3Q6RI45 1802 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 C5orf67F2Z3F1 127 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 PSMB6P28072 239 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 SOX8P57073 446 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 CDK5Q00535 292 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 ZIC1Q15915 447 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 MICBQ29980 383 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 STUMQ69YW2 141 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF705AQ6ZN79 300 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-201ENST00000254630 PRSS42Q7Z5A4 293 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 GPR32P1Q8NGA4 272 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 OR5B3Q8NH48 314 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 MOB3AQ96BX8 217 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 ALG14Q96F25 216 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 C4orf45Q96LM5 186 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 UBTD1Q9HAC8 227 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 LHX9Q9NQ69 397 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 MICAL3Q7RTP6 2002 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 RBP4P02753 201 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 TRAPPC2P0DI81 140 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 TRAPPC2BP0DI82 140 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 EPXP11678 715 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 ZBTB25P24278 435 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 AKR1C3P42330 323 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 RNF165Q6ZSG1 346 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 SLC36A1Q7Z2H8 476 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 OR52B4Q8NGK2 314 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 FBXO8Q9NRD0 319 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF835Q9Y2P0 537 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms