RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 CHID1Q9BWS9 393 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 TLNRD1Q9H1K6 362 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 ABCB9Q9NP78 766 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 A0A1B0GVI7 797 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 CLPSL1A2RUU4 121 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 ARRDC5A6NEK1 342 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 PRR23D1E9PI22 279 aaPredicted RBP17.37■□□□□ 0.37
NEDD8-201ENST00000250495 NDUFB3O43676 98 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 LYNP07948 512 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 PRR23D2P0DMB1 279 aaPredicted RBP17.37■□□□□ 0.37
NEDD8-201ENST00000250495 RELBQ01201 579 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 ATPAF1Q5TC12 328 aaPredicted RBP17.37■□□□□ 0.37
NEDD8-201ENST00000250495 CMTM4Q8IZR5 234 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 OR10Z1Q8NGY1 313 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 OTOSQ8NHW6 89 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 THEM6Q8WUY1 208 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 ITPKCQ96DU7 683 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 ASB9Q96DX5 294 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 RTL8AQ9BWD3 113 aa17.37■□□□□ 0.37
NEDD8-201ENST00000250495 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.36■□□□□ 0.37
NEDD8-201ENST00000250495 GNGT2O14610 69 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 CIB2O75838 187 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 HMGN1P05114 100 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 POU1F1P28069 291 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 TGM4P49221 684 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 GINS1Q14691 196 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 LRRC10Q5BKY1 277 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 VMO1Q7Z5L0 202 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 LDLRAD3Q86YD5 345 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 NPRL2Q8WTW4 380 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 WFDC12Q8WWY7 111 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 DNTTIP1Q9H147 329 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 DPAGT1Q9H3H5 408 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 PPP1R3EQ9H7J1 279 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 HAO2Q9NYQ3 351 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 ONECUT1Q9UBC0 465 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 CAB39Q9Y376 341 aaPredicted RBP17.36■□□□□ 0.37
NEDD8-201ENST00000250495 FAM96BQ9Y3D0 163 aa17.36■□□□□ 0.37
NEDD8-201ENST00000250495 A0A0U1RQK1 487 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 A0A1B0GW55 424 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 TMEM210A6NLX4 147 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 ACOT8O14734 319 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 CST4P01036 141 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 DUX4L2P0CJ85 424 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 DUX4L3P0CJ86 424 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 DUX4L4P0CJ87 422 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 DUX4L5P0CJ88 424 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 DUX4L6P0CJ89 424 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 DUX4L7P0CJ90 424 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 IER3P46695 156 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 PRDX4Q13162 271 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 PLBD1Q6P4A8 553 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 DUX4L9Q6RFH8 374 aaPredicted RBP17.35■□□□□ 0.37
NEDD8-201ENST00000250495 METAP1DQ6UB28 335 aaPredicted RBP17.35■□□□□ 0.37
NEDD8-201ENST00000250495 PDZD9Q8IXQ8 264 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 FGFRL1Q8N441 504 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 FAM216BQ8N7L0 139 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 PIGCQ92535 297 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 NIPAL2Q9H841 368 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 PDP1Q9P0J1 537 aaPredicted RBP17.35■□□□□ 0.37
NEDD8-201ENST00000250495 DNAJB11Q9UBS4 358 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 DUX4Q9UBX2 424 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 ZNF391Q9UJN7 358 aa17.35■□□□□ 0.37
NEDD8-201ENST00000250495 ZNF850A8MQ14 1090 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 PRODHO43272 600 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 IGHV4-59P01825 116 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 HOXB6P17509 224 aaKnown RBP17.34■□□□□ 0.37
NEDD8-201ENST00000250495 GUCA2AQ02747 115 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 IKZF1Q13422 519 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 OCLNQ16625 522 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 FAM76BQ5HYJ3 339 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 STUMQ69YW2 141 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 MEGF8Q7Z7M0 2845 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 PIP4P2Q8N4L2 257 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 OR5T2Q8NGG2 359 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 LRTOMTQ8WZ04 291 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 OR5P3Q8WZ94 311 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 CCDC124Q96CT7 223 aaKnown RBP17.34■□□□□ 0.37
NEDD8-201ENST00000250495 SEH1LQ96EE3 360 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 MED30Q96HR3 178 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 RNF170Q96K19 258 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 HIST1H2AAQ96QV6 131 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 DCTN5Q9BTE1 182 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 DCLRE1BQ9H816 532 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 ZNF556Q9HAH1 456 aa17.34■□□□□ 0.37
NEDD8-201ENST00000250495 GPR137BO60478 399 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 SELENOFO60613 162 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 OSMP13725 252 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 EEF1B2P24534 225 aaKnown RBP17.33■□□□□ 0.36
NEDD8-201ENST00000250495 SRSF4Q08170 494 aaKnown RBP17.33■□□□□ 0.36
NEDD8-201ENST00000250495 SLC35D3Q5M8T2 416 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 BRICD5Q6PL45 260 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 GDPGP1Q6ZNW5 385 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 KCTD8Q6ZWB6 473 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 CPOQ8IVL8 374 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 ADGRG5Q8IZF4 528 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 RPL3LQ92901 407 aaKnown RBP17.33■□□□□ 0.36
NEDD8-201ENST00000250495 PKP2Q99959 881 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 CITED1Q99966 193 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 THTPAQ9BU02 230 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms