RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TIMM23BQ5SRD1 257 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 TMEM211Q6ICI0 200 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 CRIP3Q6Q6R5 217 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 GLIPR1L1Q6UWM5 242 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 FBXW12Q6X9E4 464 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 GDPD3Q7L5L3 318 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 SSX8Q7RTT4 187 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 PAQR4Q8N4S7 273 aaPredicted RBP12.26□□□□□ -0.45
SDF2-201ENST00000247020 KDF1Q8NAX2 398 aaPredicted RBP12.26□□□□□ -0.45
SDF2-201ENST00000247020 FCAMRQ8WWV6 532 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 FAM46BQ96A09 425 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 BORCS8Q96FH0 119 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 C1orf147Q96MC9 270 aaPredicted RBP12.26□□□□□ -0.45
SDF2-201ENST00000247020 CST11Q9H112 138 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 ATG5Q9H1Y0 275 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 GPR173Q9NS66 373 aa12.26□□□□□ -0.45
SDF2-201ENST00000247020 RBFOX1Q9NWB1 397 aaKnown RBP12.26□□□□□ -0.45
SDF2-201ENST00000247020 RBMX2Q9Y388 322 aaKnown RBP12.26□□□□□ -0.45
SDF2-201ENST00000247020 MYO7BQ6PIF6 2116 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 LYRM1O43325 122 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 SMPD2O60906 423 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 CHRM2P08172 466 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 IL32P24001 234 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 OR3A4PP47883 348 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 ATP1B3P54709 279 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 AP3S2P59780 193 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 DGCR2P98153 550 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 PLA2G7Q13093 441 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 UNC119Q13432 240 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 ZNF57Q68EA5 555 aaPredicted RBP12.25□□□□□ -0.45
SDF2-201ENST00000247020 ZNF474Q6S9Z5 364 aaPredicted RBP12.25□□□□□ -0.45
SDF2-201ENST00000247020 ZNF101Q8IZC7 436 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 TOMM5Q8N4H5 51 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 OR56B2PQ8NGI1 322 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 S100A13Q99584 98 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 C11orf54Q9H0W9 315 aaPredicted RBP12.25□□□□□ -0.45
SDF2-201ENST00000247020 ELOVL5Q9NYP7 299 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 PTTG3PQ9NZH4 202 aa12.25□□□□□ -0.45
SDF2-201ENST00000247020 CENPXA8MT69 81 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 A8MXE2 369 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 ZNF780AO75290 641 aaPredicted RBP12.24□□□□□ -0.45
SDF2-201ENST00000247020 NGFP01138 241 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 GSTT2BP0CG30 244 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 ZP1P60852 638 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 GPR176Q14439 515 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 CCBE1Q6UXH8 406 aaPredicted RBP12.24□□□□□ -0.45
SDF2-201ENST00000247020 ASCL4Q6XD76 172 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 RFPL4BQ6ZWI9 263 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 ZGRF1Q86YA3 2104 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 IZUMO1Q8IYV9 350 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 DTX3Q8N9I9 347 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 STEAP2Q8NFT2 490 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 SPACA5Q96QH8 159 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 VKORC1Q9BQB6 163 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 URM1Q9BTM9 101 aaKnown RBP12.24□□□□□ -0.45
SDF2-201ENST00000247020 OR10A4Q9H209 315 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 KCNK15Q9H427 330 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 SCPEP1Q9HB40 452 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 MPC1Q9Y5U8 109 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 SLC25A15Q9Y619 301 aa12.24□□□□□ -0.45
SDF2-201ENST00000247020 LAMA5O15230 3695 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 A0A0G2JNJ9 132 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 CDC14BO60729 498 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 SELEP16581 610 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 GDNFP39905 211 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 RFX2P48378 723 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 MTCP1P56278 107 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 TSC22D1Q15714 1073 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 PRR30Q53SZ7 412 aaPredicted RBP12.23□□□□□ -0.45
SDF2-201ENST00000247020 PLCXD3Q63HM9 321 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 NRARPQ7Z6K4 114 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 BIVMQ86UB2 503 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 ST6GALNAC3Q8NDV1 305 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 DUSP18Q8NEJ0 188 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 PXT1Q8NFP0 134 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 TNFAIP8L1Q8WVP5 186 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 PIGCQ92535 297 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 WBP1Q96G27 269 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 POM121Q96HA1 1249 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 NKX3-1Q99801 234 aaPredicted RBP12.23□□□□□ -0.45
SDF2-201ENST00000247020 TMEM59Q9BXS4 323 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 BCL2L14Q9BZR8 327 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 PCDHB16Q9NRJ7 776 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 TAS2R8Q9NYW2 309 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 Q9UFV3 132 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 TINAGQ9UJW2 476 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 CACNA1AO00555 2505 aa12.23□□□□□ -0.45
SDF2-201ENST00000247020 TRAV18A0A075B6X5 111 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 A0A1W2PR80 420 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 NAP1L6A6NFF2 107 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 CD300LBA8K4G0 201 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 RAB27BO00194 218 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 LANCL1O43813 399 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 ORC5O43913 435 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 KDM4BO94953 1096 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 CELA3BP08861 270 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 CD3GP09693 182 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 ZNF35P13682 527 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 RAC2P15153 192 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 PRSS3P35030 304 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms