RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 WT1P19544 449 aaPredicted RBP12.57□□□□□ -0.4
PRKAB1-201ENST00000229328 ARG2P78540 354 aa12.57□□□□□ -0.4
PRKAB1-201ENST00000229328 CD163Q86VB7 1156 aa12.57□□□□□ -0.4
PRKAB1-201ENST00000229328 BPIFB2Q8N4F0 458 aa12.57□□□□□ -0.4
PRKAB1-201ENST00000229328 CPEB3Q8NE35 698 aaKnown RBP12.57□□□□□ -0.4
PRKAB1-201ENST00000229328 SEMA6DQ8NFY4 1073 aa12.57□□□□□ -0.4
PRKAB1-201ENST00000229328 ZNF431Q8TF32 576 aaPredicted RBP12.57□□□□□ -0.4
PRKAB1-201ENST00000229328 PRRG4Q9BZD6 226 aa12.57□□□□□ -0.4
PRKAB1-201ENST00000229328 RANBP3Q9H6Z4 567 aaPredicted RBP12.57□□□□□ -0.4
PRKAB1-201ENST00000229328 FAM86C1Q9NVL1 165 aa12.57□□□□□ -0.4
PRKAB1-201ENST00000229328 MCTS1Q9ULC4 181 aaKnown RBP12.57□□□□□ -0.4
PRKAB1-201ENST00000229328 SNRPGP15A8MWD9 76 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 RAD51DO75771 328 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 TOXO94900 526 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 NAT2P11245 290 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 CPN1P15169 458 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 SLC10A1Q14973 349 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 C2orf68Q2NKX9 166 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 ZNF766Q5HY98 468 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 PABPC1L2AQ5JQF8 200 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 SPERTQ8NA61 448 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 TNFAIP8L1Q8WVP5 186 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 GPN1Q9HCN4 374 aaPredicted RBP12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 ZNF292O60281 2723 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 ZNF780AO75290 641 aaPredicted RBP12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 CHRM2P08172 466 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 CD82P27701 267 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 GSK3AP49840 483 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 PCBD1P61457 104 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 TCF15Q12870 199 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 SCGB2B2Q4G0G5 96 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 MUC20Q8N307 709 aaPredicted RBP12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 PNLDC1Q8NA58 520 aaKnown RBP12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 OR13C8Q8NGS7 320 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 HAS2Q92819 552 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 RAB3CQ96E17 227 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 ARHGAP5-AS1Q96IT6 56 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 LINC00470Q9BZP3 86 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 POFUT1Q9H488 388 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 B3GNT2Q9NY97 397 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 PIPOXQ9P0Z9 390 aa12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 ZNF107Q9UII5 783 aaPredicted RBP12.56□□□□□ -0.4
PRKAB1-201ENST00000229328 RIF1Q5UIP0 2472 aaKnown RBP12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 PRRC2CQ9Y520 2896 aaKnown RBP12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 OR14I1A6ND48 311 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 SCGNO76038 276 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 ALX3O95076 343 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 PMP22Q01453 160 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 OR2T35Q8NGX2 323 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 NUDT16L1Q9BRJ7 211 aaKnown RBP12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 BCO1Q9HAY6 547 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 ACKR4Q9NPB9 350 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 SCP2D1Q9UJQ7 156 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 ZNF503-AS2A6NEH8 195 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 CRYZL1O95825 349 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 UBBP0CG47 229 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 HIST1H1DP16402 221 aaKnown RBP12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 SERPINA2P20848 420 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 ZNF92Q03936 586 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 FAM109AQ8N4B1 249 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 SPICQ8N5J4 248 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 MRGPRFQ96AM1 343 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 C10orf35Q96D05 121 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 PARPBPQ9NWS1 579 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 SPRR3Q9UBC9 169 aa12.55□□□□□ -0.4
PRKAB1-201ENST00000229328 FARS2O95363 451 aaKnown RBP12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 DNASE1P24855 282 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 HRH1P35367 487 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 ALDH3B1P43353 468 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 CCL11P51671 97 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 RPS27AP62979 156 aaKnown RBP12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 RIPPLY1Q0D2K3 151 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 C17orf107Q6ZR85 190 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 TMED4Q7Z7H5 227 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 OR51T1Q8NGJ9 327 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 SNAPC3Q92966 411 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 GON7Q9BXV9 100 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 IFT46Q9NQC8 304 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 FAM186AA6NE01 2351 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 URB1O60287 2271 aaKnown RBP12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 IGKV1-27A0A075B6S5 117 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 LOC100509620A0A075B734 347 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 TMEM82A0PJX8 343 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 ZNF587BE7ETH6 402 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 SIX6O95475 246 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 HLA-HP01893 362 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 EDN3P14138 238 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 MGMTP16455 207 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 SOX8P57073 446 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 GNG2P59768 71 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 RNASE10Q5GAN6 216 aaKnown RBP12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 ATPAF1Q5TC12 328 aaPredicted RBP12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 FAM89BQ8N5H3 189 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 UXS1Q8NBZ7 420 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 CCDC54Q8NEL0 328 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 LDAHQ9H6V9 325 aa12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 ELL3Q9HB65 397 aaPredicted RBP12.54□□□□□ -0.4
PRKAB1-201ENST00000229328 ZFHX2Q9C0A1 2572 aaPredicted RBP12.53□□□□□ -0.4
PRKAB1-201ENST00000229328 FOXI3A8MTJ6 420 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms