RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ZNF814B7Z6K7 855 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 CHRM2P08172 466 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 HCKP08631 526 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 GSTP1P09211 210 aaKnown RBP10.93□□□□□ -0.66
NUP88-201ENST00000225696 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
NUP88-201ENST00000225696 CPT2P23786 658 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 FHITP49789 147 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 DCAF7P61962 342 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 CSNK2A1P68400 391 aaPredicted RBP10.93□□□□□ -0.66
NUP88-201ENST00000225696 ZP4Q12836 540 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 ECH1Q13011 328 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 Q6ZRG5 221 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 GKN2Q86XP6 184 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 CSNK2A3Q8NEV1 391 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 KIRREL1Q96J84 757 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 C20orf24Q9BUV8 137 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 MRPL13Q9BYD1 178 aaKnown RBP10.93□□□□□ -0.66
NUP88-201ENST00000225696 CHST11Q9NPF2 352 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 SERINC1Q9NRX5 453 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 CLEC1BQ9P126 229 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 ASH2LQ9UBL3 628 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 CD207Q9UJ71 328 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 WIF1Q9Y5W5 379 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 CABIN1Q9Y6J0 2220 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 RAMP1O60894 148 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 LAP3P28838 519 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 MRPS21P82921 87 aaKnown RBP10.92□□□□□ -0.66
NUP88-201ENST00000225696 LCN10Q6JVE6 187 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 Q7L0L9 218 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 TMPRSS9Q7Z410 1059 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 PPP1R3BQ86XI6 285 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 MFSD8Q8NHS3 518 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 KCNG3Q8TAE7 436 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 DAZLQ92904 295 aaKnown RBP10.92□□□□□ -0.66
NUP88-201ENST00000225696 ERGIC1Q969X5 290 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 GPER1Q99527 375 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 NUDT16L1Q9BRJ7 211 aaKnown RBP10.92□□□□□ -0.66
NUP88-201ENST00000225696 HDHD3Q9BSH5 251 aaPredicted RBP10.92□□□□□ -0.66
NUP88-201ENST00000225696 RNF122Q9H9V4 155 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 COPS7AQ9UBW8 275 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 FBXL17Q9UF56 701 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 C5orf52A6NGY3 159 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 LIPT2A6NK58 231 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 SHISA7A6NL88 538 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 MSTNO14793 375 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 IFNA4P05014 189 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 HPNP05981 417 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 MYF5P13349 255 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 FOLR1P15328 257 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 OR3A2P47893 321 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 SULT1A2P50226 295 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 TMEM33P57088 247 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 CFHR1Q03591 330 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 RAB30Q15771 203 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 IAH1Q2TAA2 248 aaPredicted RBP10.92□□□□□ -0.66
NUP88-201ENST00000225696 FAM76BQ5HYJ3 339 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 FAM57BQ71RH2 274 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 OR51T1Q8NGJ9 327 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 RPS10P5Q9NQ39 176 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 ZNF581Q9P0T4 197 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 AMDHD2Q9Y303 409 aa10.92□□□□□ -0.66
NUP88-201ENST00000225696 A6NLC8 198 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 SGCEO43556 437 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 C1QL1O75973 258 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 FOSL2P15408 326 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 DRD1P21728 446 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 PTAFRP25105 342 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 RPL12P30050 165 aaKnown RBP10.91□□□□□ -0.66
NUP88-201ENST00000225696 THBS4P35443 961 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 RNF4P78317 190 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 HSD11B2P80365 405 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 SKA3Q8IX90 412 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 SSC4DQ8WTU2 575 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 SLC25A43Q8WUT9 341 aaPredicted RBP10.91□□□□□ -0.66
NUP88-201ENST00000225696 RSRP1Q9BUV0 290 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 SCRT1Q9BWW7 348 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 CNTNAP3Q9BZ76 1288 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 EGLN1Q9GZT9 426 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 LIME1Q9H400 295 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 PNRC2Q9NPJ4 139 aaKnown RBP10.91□□□□□ -0.66
NUP88-201ENST00000225696 SMCO4Q9NRQ5 59 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 KLHL13Q9P2N7 655 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 POLR1DQ9Y2S0 133 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 TIMM10BQ9Y5J6 103 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 ADAMTS9Q9P2N4 1935 aa10.91□□□□□ -0.66
NUP88-201ENST00000225696 CELSR3Q9NYQ7 3312 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 SPAG17Q6Q759 2223 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 A0A1W2PPC4 97 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 DHRS7CA6NNS2 312 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 FOXI3A8MTJ6 420 aaPredicted RBP10.9□□□□□ -0.66
NUP88-201ENST00000225696 NME2P1O60361 137 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 SCGNO76038 276 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 SNRNP70P08621 437 aaKnown RBP10.9□□□□□ -0.66
NUP88-201ENST00000225696 FOLR2P14207 255 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 BLVRBP30043 206 aaPredicted RBP10.9□□□□□ -0.66
NUP88-201ENST00000225696 FCGR2CP31995 323 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 BLKP51451 505 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 OR1D5P58170 312 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 MYBPHQ13203 477 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 MRPL24Q96A35 216 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms