RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 GPR12P47775 334 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 SCGB2A2Q13296 93 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 OR1C1Q15619 314 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 LYG2Q86SG7 212 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 VASH2Q86V25 355 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 C1orf87Q8N0U7 546 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 ZNF680Q8NEM1 530 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 OR8D4Q8NGM9 314 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 SPSB1Q96BD6 273 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 S1PR3Q99500 378 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 TRAV17A0A0B4J275 112 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 E5RGE8 158 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 POU2F2P09086 479 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 CBR1P16152 277 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 INSL4Q14641 139 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 ADAM5Q6NVV9 412 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 DRAM2Q6UX65 266 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 WDR89Q96FK6 387 aaPredicted RBP10.31□□□□□ -0.76
NOD1-201ENST00000222823 NSG2Q9Y328 171 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 NEUROG3Q9Y4Z2 214 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 PTHLHP12272 177 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 RAB4AP20338 218 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 GSK3AP49840 483 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 IFITM3Q01628 133 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 MRM1Q6IN84 353 aaKnown RBP10.31□□□□□ -0.76
NOD1-201ENST00000222823 RHBDD2Q6NTF9 364 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 THNSL2Q86YJ6 484 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 CRIPAKQ8N1N5 446 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 GALNT16Q8N428 558 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 OR4S1Q8NGB4 309 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 C2orf50Q96LR7 162 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 ZNF629Q9UEG4 869 aaPredicted RBP10.31□□□□□ -0.76
NOD1-201ENST00000222823 KPTNQ9Y664 436 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 SPRY1O43609 319 aaPredicted RBP10.3□□□□□ -0.76
NOD1-201ENST00000222823 SCAF4O95104 1147 aaKnown RBP10.3□□□□□ -0.76
NOD1-201ENST00000222823 IL34Q6ZMJ4 242 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 TMEM182Q6ZP80 229 aaPredicted RBP10.3□□□□□ -0.76
NOD1-201ENST00000222823 ANKRD37Q7Z713 158 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 FBXW5Q969U6 566 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 MOGAT1Q96PD6 335 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 PATZ1Q9HBE1 687 aaKnown RBP10.3□□□□□ -0.76
NOD1-201ENST00000222823 ADGRL4Q9HBW9 690 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 ZFP64Q9NPA5 681 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 PYCARD-AS1I3L0S3 204 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 M0R1B8 84 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 AKR7A2O43488 359 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 MT-CO3P00414 261 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 FUT3P21217 361 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 SUB1P53999 127 aaKnown RBP eCLIP10.3□□□□□ -0.76
NOD1-201ENST00000222823 HABP2Q14520 560 aaPredicted RBP10.3□□□□□ -0.76
NOD1-201ENST00000222823 PNLIPRP3Q17RR3 467 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 TMEM128Q5BJH2 165 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 CDH26Q8IXH8 852 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 RELL2Q8NC24 303 aaPredicted RBP10.3□□□□□ -0.76
NOD1-201ENST00000222823 OR52B4Q8NGK2 314 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 OR1J1Q8NGS3 322 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 KISS1RQ969F8 398 aaPredicted RBP10.3□□□□□ -0.76
NOD1-201ENST00000222823 KIR2DL1P43626 348 aaPredicted RBP10.3□□□□□ -0.76
NOD1-201ENST00000222823 RAB5CP51148 216 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 CD300CQ08708 224 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 BATFQ16520 125 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 SLC25A30Q5SVS4 291 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 SPATA46Q5T0L3 261 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 AVPI1Q5T686 147 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 C15orf54Q8N8G6 183 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 TMEM229BQ8NBD8 167 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 OR10P1Q8NGE3 313 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 OR2I1PQ8NGU4 316 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 CMTM2Q8TAZ6 248 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 CMTM3Q96MX0 182 aa10.3□□□□□ -0.76
NOD1-201ENST00000222823 TINAGL1Q9GZM7 467 aaPredicted RBP10.3□□□□□ -0.76
NOD1-201ENST00000222823 ARPC4-TTLL3A0A0A6YYG9 625 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 OIP5O43482 229 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 NME2P1O60361 137 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 CTLA4P16410 223 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 NPBWR1P48145 328 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 TMEM41BQ5BJD5 291 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 PWWP2BQ6NUJ5 590 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 C17orf47Q8NEP4 570 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 EDARADDQ8WWZ3 215 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 ZNF416Q9BWM5 594 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 NXF2Q9GZY0 626 aaKnown RBP10.29□□□□□ -0.76
NOD1-201ENST00000222823 LIN7CQ9NUP9 197 aaKnown RBP10.29□□□□□ -0.76
NOD1-201ENST00000222823 AK3Q9UIJ7 227 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 RIF1Q5UIP0 2472 aaKnown RBP10.29□□□□□ -0.76
NOD1-201ENST00000222823 C5orf67F2Z3F1 127 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 CLN5O75503 358 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 GPANK1O95872 356 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 PSG6Q00889 435 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 FZD5Q13467 585 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 PLA1AQ53H76 456 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 LCN15Q6UWW0 184 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 UBE3DQ7Z6J8 389 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 OR4D9Q8NGE8 314 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 OR4D11Q8NGI4 311 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 ST8SIA4Q92187 359 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 URGCP-MRPS24S4R325 110 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 MYOFQ9NZM1 2061 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 AKAP6Q13023 2319 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 A0A1B0GTH9 108 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms