RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 BAMBIQ13145 260 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 B3GNTL1Q67FW5 361 aaPredicted RBP16.95■□□□□ 0.3
SMPD3-201ENST00000219334 GAL3ST2Q9H3Q3 398 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 TMEM127O75204 238 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 PPP1CAP62136 330 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 C16orf47Q6ZP98 133 aaPredicted RBP16.95■□□□□ 0.3
SMPD3-201ENST00000219334 NPEPL1Q8NDH3 523 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 MCHR2Q969V1 340 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 DDX60LQ5H9U9 1706 aaKnown RBP16.95■□□□□ 0.3
SMPD3-201ENST00000219334 SCN7AQ01118 1682 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 MYH14Q7Z406 1995 aaKnown RBP16.95■□□□□ 0.3
SMPD3-201ENST00000219334 OR2F2O95006 317 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 EPPINO95925 133 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 IL5P05113 134 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 CEACAM3P40198 252 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 OR2F1Q13607 317 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 ACY3Q96HD9 319 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 FAM60AQ9NP50 221 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 RER1O15258 196 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 AGFG2O95081 481 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 FBP1P09467 338 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 GNG10P50151 68 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 PPP1CBP62140 327 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 VN1R4Q7Z5H5 301 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 SLC38A6Q8IZM9 456 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 OR5D13Q8NGL4 314 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 LRRC29Q8WV35 223 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 PLPPR2Q96GM1 343 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 SIGLEC7Q9Y286 467 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 AMDHD2Q9Y303 409 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 TTC3P53804 2025 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 GPR31O00270 319 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 HRASP01112 189 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 GALNSP34059 522 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 LIMS2Q7Z4I7 341 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 SLC7A5P1Q8MH63 180 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 PCNPQ8WW12 178 aaKnown RBP16.94■□□□□ 0.3
SMPD3-201ENST00000219334 DOK1Q99704 481 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 PAPPAQ13219 1627 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 AQP7P3A6NL99 342 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 PRRX1P54821 245 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 A0A0B4J203 849 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 hADV38S2A0JD32 116 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 CLEC18AA5D8T8 446 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 SLC17A2O00624 439 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 SLC25A6P12236 298 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 RPL12P30050 165 aaKnown RBP16.94■□□□□ 0.3
SMPD3-201ENST00000219334 CLEC18CQ8NCF0 446 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 SCARB1Q8WTV0 552 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 CLDN23Q96B33 292 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 RAE1P78406 368 aaKnown RBP16.94■□□□□ 0.3
SMPD3-201ENST00000219334 Q56UQ5 140 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 TRAT1Q6PIZ9 186 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 LINC00299Q6ZSB3 139 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 ZNF547Q8IVP9 402 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 AMER3Q8N944 861 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 OR4F5Q8NH21 305 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 WDR34Q96EX3 536 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 OR4F4Q96R69 305 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 IL20Q9NYY1 176 aa16.94■□□□□ 0.3
SMPD3-201ENST00000219334 AMMECR1Q9Y4X0 333 aaPredicted RBP16.94■□□□□ 0.3
SMPD3-201ENST00000219334 SMLR1H3BR10 107 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 GP2P55259 537 aaKnown RBP16.93■□□□□ 0.3
SMPD3-201ENST00000219334 SNRPNP63162 240 aaKnown RBP16.93■□□□□ 0.3
SMPD3-201ENST00000219334 BTN1A1Q13410 526 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 LYG1Q8N1E2 194 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 GAB2Q9UQC2 676 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 FXYD1O00168 92 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 OIP5O43482 229 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 COX7A1P24310 79 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 RAC3P60763 192 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 TOR2AQ5JU69 321 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 BHLHA9Q7RTU4 235 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 OR4S1Q8NGB4 309 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 TVP23CQ96ET8 276 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 CHST6Q9GZX3 395 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 MAGT1Q9H0U3 335 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 SERTM2A0A1B0GWG4 89 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 ZNF354AO60765 605 aaPredicted RBP16.93■□□□□ 0.3
SMPD3-201ENST00000219334 OR5I1Q13606 314 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 BHLHA15Q7RTS1 189 aaPredicted RBP16.93■□□□□ 0.3
SMPD3-201ENST00000219334 ORAI1Q96D31 301 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 PATE3B3GLJ2 98 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 DHRS3O75911 302 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 ACTL6AO96019 429 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 UBE3DQ7Z6J8 389 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 TMEM179BQ7Z7N9 219 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 HMGCLL1Q8TB92 370 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 CMBLQ96DG6 245 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 H3BMH7 237 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 SSBP1Q04837 148 aaKnown RBP16.93■□□□□ 0.3
SMPD3-201ENST00000219334 ASAH1Q13510 395 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 FBXO34Q9NWN3 711 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 TJP1Q07157 1748 aa16.93■□□□□ 0.3
SMPD3-201ENST00000219334 TRAV1-2A0A0B4J238 106 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 ACOT7LQ6ZUV0 252 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 PRSS42Q7Z5A4 293 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 D2HGDHQ8N465 521 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 RASL10BQ96S79 203 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 APC2O95996 2303 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms