RNA–Protein interactions for RNA: ENST00000057513.7

TNIP3-201, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP3, Length 2,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-201ENST00000057513 Q8WTZ3 238 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 PATE1Q8WXA2 126 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 OR11A1Q9GZK7 315 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 TGIF2Q9GZN2 237 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 TUBD1Q9UJT1 453 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 SRPK3Q9UPE1 567 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 A0A087X0M5 115 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 A0A1B0GX30 115 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 METTL12A8MUP2 240 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 A8MVM7 634 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 CDC14BO60729 498 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 LINC00271P0C7V0 271 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 FCARP24071 287 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 CRABP1P29762 137 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 SEC13P55735 322 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 LSM6P62312 80 aaKnown RBP12.11□□□□□ -0.47
TNIP3-201ENST00000057513 CSNK2A1P68400 391 aaPredicted RBP12.11□□□□□ -0.47
TNIP3-201ENST00000057513 ZNF117Q03924 483 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 KHDC3LQ587J8 217 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 MRPL43Q8N983 215 aaKnown RBP12.11□□□□□ -0.47
TNIP3-201ENST00000057513 CSNK2A3Q8NEV1 391 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 SLC26A10Q8NG04 563 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 OR5D14Q8NGL3 314 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 EMG1Q92979 244 aaKnown RBP12.11□□□□□ -0.47
TNIP3-201ENST00000057513 FAM60AQ9NP50 221 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 PRTFDC1Q9NRG1 225 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 MRPS28Q9Y2Q9 187 aaKnown RBP12.11□□□□□ -0.47
TNIP3-201ENST00000057513 URGCP-MRPS24S4R325 110 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 VCANP13611 3396 aa12.11□□□□□ -0.47
TNIP3-201ENST00000057513 ZNF726A6NNF4 738 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 H0Y8X5 98 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 TERTO14746 1132 aaKnown RBP12.1□□□□□ -0.47
TNIP3-201ENST00000057513 HCRTR2O43614 444 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 ADH1BP00325 375 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 CLPSP04118 112 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 HLA-DOBP13765 273 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 SERPINA2P20848 420 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 MMP16P51512 607 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 SNU13P55769 128 aaKnown RBP12.1□□□□□ -0.47
TNIP3-201ENST00000057513 FOXK1P85037 733 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 ELOBQ15370 118 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 SSX2Q16385 188 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 HIST3H2BBQ8N257 126 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 MFSD8Q8NHS3 518 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 MRPL24Q96A35 216 aaKnown RBP12.1□□□□□ -0.47
TNIP3-201ENST00000057513 C1orf147Q96MC9 270 aaPredicted RBP12.1□□□□□ -0.47
TNIP3-201ENST00000057513 GINS3Q9BRX5 216 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 UCK1Q9HA47 277 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 PLEKHA2Q9HB19 425 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 FAM206AQ9NX38 181 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 CPAMD8Q8IZJ3 1885 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 BORCS7-ASMTA0A0B4J1R7 106 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 BTBD17A6NE02 478 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 ZNF587BE7ETH6 402 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 PPP1R2P9O14990 202 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 FKTNO75072 461 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 NUDT14O95848 222 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 RNH1P13489 461 aaKnown RBP12.1□□□□□ -0.47
TNIP3-201ENST00000057513 OR3A4PP47883 348 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 DHPSP49366 369 aaPredicted RBP12.1□□□□□ -0.47
TNIP3-201ENST00000057513 SUCLG1P53597 346 aaKnown RBP12.1□□□□□ -0.47
TNIP3-201ENST00000057513 PKIAP61925 76 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 GGNBP1Q5YKI7 109 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 HSD17B11Q8NBQ5 300 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 ADOQ96SZ5 270 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 SSX3Q99909 188 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 TMEM59Q9BXS4 323 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 HRASLS2Q9NWW9 162 aa12.1□□□□□ -0.47
TNIP3-201ENST00000057513 C14orf166Q9Y224 244 aaKnown RBP12.1□□□□□ -0.47
TNIP3-201ENST00000057513 PHF3Q92576 2039 aaKnown RBP12.09□□□□□ -0.47
TNIP3-201ENST00000057513 A0A0J9YY10 115 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 A6NCN8 305 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 SLC2A1P11166 492 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 P2RY1P47900 373 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 IGLV3-21P80748 117 aaPredicted RBP12.09□□□□□ -0.47
TNIP3-201ENST00000057513 PRR22Q8IZ63 422 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 ZNF321PQ8N8H1 164 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 RNASE11Q8TAA1 199 aaKnown RBP12.09□□□□□ -0.47
TNIP3-201ENST00000057513 KCNG3Q8TAE7 436 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 RAB39BQ96DA2 213 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 NXF5Q9H1B4 397 aaKnown RBP12.09□□□□□ -0.47
TNIP3-201ENST00000057513 BCO1Q9HAY6 547 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 TMED3Q9Y3Q3 217 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 HS3ST3B1Q9Y662 390 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 LINC01553A4QN01 128 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 TSTD3H0UI37 97 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 H3BQ15 152 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 RPL36A-HNRNPH2H7BZ11 118 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 DXOO77932 396 aaKnown RBP12.09□□□□□ -0.47
TNIP3-201ENST00000057513 NSA2O95478 260 aaKnown RBP12.09□□□□□ -0.47
TNIP3-201ENST00000057513 IL33O95760 270 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 MT-ATP6P00846 226 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 TAGLN2P37802 199 aaKnown RBP12.09□□□□□ -0.47
TNIP3-201ENST00000057513 APOBEC1P41238 236 aaKnown RBP12.09□□□□□ -0.47
TNIP3-201ENST00000057513 ERVFRD-1P60508 538 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 ACY1Q03154 408 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 UBE2V2Q15819 145 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 SFTPA2Q8IWL1 248 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 FAM213BQ8TBF2 198 aa12.09□□□□□ -0.47
TNIP3-201ENST00000057513 PBOV1Q9GZY1 135 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms