RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 SMIM7Q9BQ49 75 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 EMC6Q9BV81 110 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 TMEM59Q9BXS4 323 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 STRADBQ9C0K7 418 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 PLEKHA3Q9HB20 300 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 SLC22A13Q9Y226 551 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 CLDN34H7C241 214 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 ZNF749O43361 778 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 TRAF3IP2O43734 574 aaPredicted RBP10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 MT-ATP6P00846 226 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 HOXC12P31275 282 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 MFGE8Q08431 387 aaPredicted RBP10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 GAMTQ14353 236 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 ZIC1Q15915 447 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 TMEM268Q5VZI3 342 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 ZNF660Q6AZW8 331 aaPredicted RBP10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 FAM199XQ6PEV8 388 aaPredicted RBP10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 FAM57BQ71RH2 274 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 OR13C8Q8NGS7 320 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 BORCS8Q96FH0 119 aa10.91□□□□□ -0.66
TSPAN9-201ENST00000011898 NOTCH4Q99466 2003 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 A0A087WUJ7 227 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 A0A1W2PPV9 198 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 G3V3Q6 166 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 SEMG1P04279 462 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 GABRR1P24046 479 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 DHRS2Q13268 280 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 TMEM183BQ1AE95 376 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 MRM1Q6IN84 353 aaKnown RBP10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 OGFOD3Q6PK18 319 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 TFAP2EQ6VUC0 442 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 GRINAQ7Z429 371 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 C17orf78Q8N4C9 275 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 TMEM104Q8NE00 496 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 MARCH1Q8TCQ1 289 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 ZNF775Q96BV0 537 aaPredicted RBP10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 NOSIPQ9Y314 301 aaKnown RBP10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 MRPS2Q9Y399 296 aaKnown RBP10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 WSB1Q9Y6I7 421 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 UNC13CQ8NB66 2214 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 IGHV3-20A0A0C4DH32 117 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 A0A1W2PPV4 95 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 ZFPL1O95159 310 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 FGF2P09038 288 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 ZNF93P35789 620 aaPredicted RBP10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 NHLRC3Q5JS37 347 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 ZNF770Q6IQ21 691 aaPredicted RBP10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 WDR88Q6ZMY6 472 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 LYG2Q86SG7 212 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 ADGRE4PQ86SQ3 457 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 OR13D1Q8NGV5 346 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 TSLPQ969D9 159 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 NUDT9Q9BW91 350 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 NYNRINQ9P2P1 1898 aaKnown RBP10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 ANGPTL7O43827 346 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 EIF4E2O60573 245 aaKnown RBP10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 P04436 131 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 GABRA2P47869 451 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 HIST1H3AP68431 136 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 SLC36A2Q495M3 483 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 MAMSTRQ6ZN01 415 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 UBALD2Q8IYN6 164 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 SLC22A24Q8N4F4 322 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 ZNF845Q96IR2 970 aaPredicted RBP10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 NRIP2Q9BQI9 281 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 MSL2Q9HCI7 577 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 KLHL13Q9P2N7 655 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 PAM16Q9Y3D7 125 aa10.9□□□□□ -0.66
TSPAN9-201ENST00000011898 PRAMEF25A6NGN4 478 aa10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 XRCC2O43543 280 aa10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 C2orf76Q3KRA6 126 aa10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 SLC25A30Q5SVS4 291 aa10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 ATPAF1Q5TC12 328 aaPredicted RBP10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 PRAMEF20Q5VT98 475 aa10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 TMPPEQ6ZT21 453 aa10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 ANGPTL5Q86XS5 388 aa10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 ADGRL4Q9HBW9 690 aa10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 LYRM2Q9NU23 88 aaPredicted RBP10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 MMP17Q9ULZ9 603 aa10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 STRAPQ9Y3F4 350 aaKnown RBP10.9□□□□□ -0.67
TSPAN9-201ENST00000011898 CACNA1BQ00975 2339 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 MPTX1A8MV57 137 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 K7ERU9 68 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 NDUFB7P17568 137 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 ALOX5APP20292 161 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 HSF1Q00613 529 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 FAM53BQ14153 422 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 UBE2V2Q15819 145 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 EMC4Q5J8M3 183 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 KCNG3Q8TAE7 436 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 ZNF552Q9H707 407 aaPredicted RBP10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 FKRPQ9H9S5 495 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 BET1LQ9NYM9 111 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 DNASE2O00115 360 aaPredicted RBP10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 ST8SIA3O43173 380 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 DOC2BQ14184 412 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 INPP5JQ15735 1006 aaPredicted RBP10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 Q6ZN92 141 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 OR51A4Q8NGJ6 313 aa10.89□□□□□ -0.67
TSPAN9-201ENST00000011898 NUDCD2Q8WVJ2 157 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms