RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 EPXP11678 715 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 CD68P34810 354 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ACSM5Q6NUN0 579 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ABHD17CQ6PCB6 329 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ZFP41Q8N8Y5 198 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 FAM71CQ8NEG0 241 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 PMCHL2Q9BQD1 86 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 MARCH4Q9P2E8 410 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TMED7Q9Y3B3 224 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 OR52A4PA6NMU1 304 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ACP1P24666 158 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ISL1P61371 349 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 PMCHL1Q16048 86 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM241Q24JQ0 296 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 OR2D3Q8NGH3 330 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF296Q8WUU4 475 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 PPP1R1CQ8WVI7 109 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TMIGD2Q96BF3 282 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 MARVELD1Q9BSK0 173 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ADGRL4Q9HBW9 690 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 GJA4P35212 333 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 SRP14P37108 136 aaKnown RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ACVR1Q04771 509 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 GLDNQ6ZMI3 551 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 OSTM1Q86WC4 334 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 GABRG1Q8N1C3 465 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 RHBDD1Q8TEB9 315 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 MACROD1Q9BQ69 325 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 SLC25A18Q9H1K4 315 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 FAM206AQ9NX38 181 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 CLCF1Q9UBD9 225 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 RALYQ9UKM9 306 aaKnown RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TRAPPC1Q9Y5R8 145 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 PLPP2O43688 288 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 DHRS3O75911 302 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 PKIAP61925 76 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 JOSD1Q15040 202 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ISXQ2M1V0 245 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 OR4A47Q6IF82 309 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM207Q6UWW9 146 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 OR4A4PQ8NGN8 299 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ST8SIA2Q92186 375 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 VSX1Q9NZR4 365 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF256Q9Y2P7 627 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 MYO9AB2RTY4 2548 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 PTPN13Q12923 2485 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 LILRA5A6NI73 299 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 FUT3P21217 361 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 BRS3P32247 399 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 IRS1P35568 1242 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 RPL29P47914 159 aaKnown RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 SLC10A2Q12908 348 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TESK1Q15569 626 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM211Q6ICI0 200 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 LILRB1Q8NHL6 650 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ACY3Q96HD9 319 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 SONP18583 2426 aaKnown RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 OR13C7P0DN81 318 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 FCGR2CP31995 323 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 SIM1P81133 766 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 SLC25A30Q5SVS4 291 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 PWWP2BQ6NUJ5 590 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF813Q6ZN06 617 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 STPG3Q8N7X2 389 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF383Q8NA42 475 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 TEAD3Q99594 435 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM38BQ9NVV0 291 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 PCDHGA9Q9Y5G4 932 aaKnown RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 M0R1X1 148 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 AP4M1O00189 453 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 DCTN6O00399 190 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 SMAD9O15198 467 aaKnown RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 CLDN17P56750 224 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 GNG3P63215 75 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 SHBQ15464 509 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 FAM209BQ5JX69 171 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 AFMIDQ63HM1 303 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 CYHR1Q6ZMK1 362 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 TAS1R1Q7RTX1 841 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 PIK3IP1Q96FE7 263 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 NAA50Q9GZZ1 169 aaKnown RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 UQCC1Q9NVA1 299 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 A0A1B0GV50 99 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 A0A1B0GWA3 101 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 HOXC11O43248 304 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 TBX19O60806 448 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 TYMSP04818 313 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 HOXC4P09017 264 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-201ENST00000011700 GALR1P47211 349 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 RGRP47804 291 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 ETFDHQ16134 617 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 Q6ZN92 141 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM130Q8N3G9 435 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 OR6S1Q8NH40 331 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 RAB33BQ9H082 229 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 OTOGLQ3ZCN5 2332 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 LOC107986453A0A1B0GWG9 222 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 MBTPS2O43462 519 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 SP1P08047 785 aa5.5□□□□□ -1.53
VPS13D-201ENST00000011700 IFI6P09912 130 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms