RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 A0A1W2PPW3 197 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 EFCAB10A6NFE3 127 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 METTL15A6NJ78 407 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 B9A039 149 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 E9PI62 339 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 LOC110117498-PIK3R3F6TDL0 507 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 TBX1O43435 398 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 DENRO43583 198 aaKnown RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 ZNF254O75437 659 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 RP2O75695 350 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 SULT1C4O75897 302 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 RPP14O95059 124 aaKnown RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 IGHV3-13P01766 116 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 HTR1AP08908 422 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 C21orf33P30042 268 aaPredicted RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 KIR3DL2P43630 455 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 NANOS3P60323 173 aaKnown RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 SNRPD2P62316 118 aaKnown RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 ACTA2P62736 377 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 ACTG2P63267 376 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 ZNF92Q03936 586 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 ST3GAL4Q11206 333 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 HNRNPA0Q13151 305 aaKnown RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 GALEQ14376 348 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 ZNF829Q3KNS6 432 aaPredicted RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 KLHL22Q53GT1 634 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 BCL2L15Q5TBC7 163 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 OR2G6Q5TZ20 316 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 XAF1Q6GPH4 301 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 OR2T2Q6IF00 324 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 SHISA2Q6UWI4 295 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 FBXW12Q6X9E4 464 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 Q6ZR03 302 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 MRPL21Q7Z2W9 205 aaKnown RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 FAM220AQ7Z4H9 259 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 PRSS35Q8N3Z0 413 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 ZNF540Q8NDQ6 660 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 BHLHE23Q8NDY6 225 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 SNX33Q8WV41 574 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 RORBQ92753 470 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 DVL3Q92997 716 aaPredicted RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 SPSB4Q96A44 273 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 TMEM186Q96B77 213 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 CMBLQ96DG6 245 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 PGAM5Q96HS1 289 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 LYZL4Q96KX0 146 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 SIGLEC11Q96RL6 698 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 PBOV1Q9GZY1 135 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 RASSF4Q9H2L5 321 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 NIPAL2Q9H841 368 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 INPP5EQ9NRR6 644 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 HIF1ANQ9NWT6 349 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 CNOT2Q9NZN8 540 aaKnown RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 ERVK-18Q9QC07 812 aa6.25□□□□□ -1.41
PHGDH-225ENST00000641720 NUFIP1Q9UHK0 495 aaKnown RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 PURGQ9UJV8 347 aaKnown RBP6.25□□□□□ -1.41
PHGDH-225ENST00000641720 LOC105371242A0A075B767 164 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 IRGMA1A4Y4 181 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 B4DSR2 109 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 H3BSH0 61 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 TRIM77I1YAP6 450 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 J3QLW9 94 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 M0R233 179 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 TIMM8AO60220 97 aaPredicted RBP6.24□□□□□ -1.41
PHGDH-225ENST00000641720 NCR1O76036 304 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 LALBAP00709 142 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 IGLV3-1P01715 115 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 TTRP02766 147 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 MT-ND2P03891 347 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 CDK1P06493 297 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 NAT2P11245 290 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 RAC2P15153 192 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 ZNF19P17023 458 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 ATF4P18848 351 aaPredicted RBP6.24□□□□□ -1.41
PHGDH-225ENST00000641720 KITLGP21583 273 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 CRHBPP24387 322 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 ACKR3P25106 362 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 DCKP27707 260 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 GCH1P30793 250 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 DCTDP32321 178 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 EVX1P49640 407 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 MMP15P51511 669 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 MMP16P51512 607 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 SLC35A2P78381 396 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 CARTPTQ16568 116 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 TIGD6Q17RP2 521 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 NKPD1Q17RQ9 610 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 ZNF718Q3SXZ3 478 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 SPRNQ5BIV9 151 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 WDR38Q5JTN6 314 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 UNQ6126/PRO20091Q6UXV3 157 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 C1QL2Q7Z5L3 287 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 GLCCI1Q86VQ1 547 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 CATSPERDQ86XM0 798 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 C1orf174Q8IYL3 243 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 OR5AS1Q8N127 324 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 SYS1Q8N2H4 156 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 ZNF485Q8NCK3 441 aa6.24□□□□□ -1.41
PHGDH-225ENST00000641720 OR56B2PQ8NGI1 322 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms