RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 NAV3Q8IVL0 2385 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 NIPBLQ6KC79 2804 aaeCLIP11.34□□□□□ -0.59
PHGDH-221ENST00000641573 SLC17A2O00624 439 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 MSTNO14793 375 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 SULT1B1O43704 296 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 CBR1P16152 277 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 FAHP16930 419 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 ZNF14P17017 642 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-221ENST00000641573 CFPP27918 469 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 IDH3GP51553 393 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-221ENST00000641573 ZNF92Q03936 586 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 P2RY14Q15391 338 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 TBC1D28Q2M2D7 210 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 METAP1DQ6UB28 335 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-221ENST00000641573 NCCRP1Q6ZVX7 275 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-221ENST00000641573 LRRC28Q86X40 367 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-221ENST00000641573 OR5AS1Q8N127 324 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 JAGN1Q8N5M9 183 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 SEMA6DQ8NFY4 1073 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 SPSB4Q96A44 273 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 APOBEC3DQ96AK3 386 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-221ENST00000641573 FOXRED1Q96CU9 486 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-221ENST00000641573 C10orf35Q96D05 121 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 PIGMQ9H3S5 423 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 LIN7BQ9HAP6 207 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 OBP2BQ9NPH6 170 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 TMEM138Q9NPI0 162 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 EXTL2Q9UBQ6 330 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 CGGBP1Q9UFW8 167 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-221ENST00000641573 OR5V1Q9UGF6 321 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 AKAP9Q99996 3911 aa11.33□□□□□ -0.6
PHGDH-221ENST00000641573 GTF3C1Q12789 2109 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 hCG_38984A0A1B0GV85 526 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 DHRS7CA6NNS2 312 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 APOA1P02647 267 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 ERCC1P07992 297 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-221ENST00000641573 CELA3BP08861 270 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 BMP5P22003 454 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 IL32P24001 234 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 ACKR3P25106 362 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 MAP2K3P46734 347 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 GSK3AP49840 483 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 FAM3AP98173 230 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 RIPPLY1Q0D2K3 151 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 MALLQ13021 153 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 MADCAM1Q13477 382 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 UBE2NLQ5JXB2 153 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 C1orf100Q5SVJ3 147 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 FAM166AQ6J272 317 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 LYPD6Q86Y78 171 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 SNX29P2Q8IUI4 249 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 PAQR4Q8N4S7 273 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-221ENST00000641573 OR4M1Q8NGD0 313 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 OR52N4Q8NGI2 321 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 OR6M1Q8NGM8 313 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 PP6455Q8WZ26 134 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 CMTM3Q96MX0 182 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 NKX3-1Q99801 234 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-221ENST00000641573 SOSTQ9BQB4 213 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 CDH20Q9HBT6 801 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 CYSLTR2Q9NS75 346 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 ZNF629Q9UEG4 869 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-221ENST00000641573 AMDHD2Q9Y303 409 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 STARD10Q9Y365 291 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 ETV7Q9Y603 341 aa11.32□□□□□ -0.6
PHGDH-221ENST00000641573 TRGV8A0A0C4DH27 118 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 OR5H1A6NKK0 313 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 A8MXE2 369 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 EEF1E1-BLOC1S5C9J1V9 151 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 EEF1E1O43324 174 aaKnown RBP11.31□□□□□ -0.6
PHGDH-221ENST00000641573 NGFP01138 241 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 ALDOBP05062 364 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 HTR2CP28335 458 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 SSTR2P30874 369 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 TALDO1P37837 337 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 WNT5AP41221 380 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 CASP6P55212 293 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 PRSS12P56730 875 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 SCAND1P57086 179 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 TNK1Q13470 666 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 TESK1Q15569 626 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 ZNF79Q15937 498 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 TMEM211Q6ICI0 200 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 XKRXQ6PP77 449 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 UTS2BQ765I0 119 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 CDH24Q86UP0 819 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 MYPOPQ86VE0 399 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-221ENST00000641573 DTX3Q8N9I9 347 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 OR51D1Q8NGF3 324 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 SLC25A28Q96A46 364 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 FAM3DQ96BQ1 224 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 DMRTA2Q96SC8 542 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 SDHCQ99643 169 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-221ENST00000641573 C1QTNF6Q9BXI9 259 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 CHST5Q9GZS9 411 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 SRRQ9GZT4 340 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 POFUT1Q9H488 388 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 ABCB10Q9NRK6 738 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 PTTG3PQ9NZH4 202 aa11.31□□□□□ -0.6
PHGDH-221ENST00000641573 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms