RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 ANXA2P2A6NMY6 339 aa20.98■□□□□ 0.95
VEGFA-232ENST00000640653 LHBP01229 141 aa20.98■□□□□ 0.95
VEGFA-232ENST00000640653 ALOX5APP20292 161 aa20.98■□□□□ 0.95
VEGFA-232ENST00000640653 COMPP49747 757 aaPredicted RBP20.98■□□□□ 0.95
VEGFA-232ENST00000640653 IL5RAQ01344 420 aa20.98■□□□□ 0.95
VEGFA-232ENST00000640653 PTGES3Q15185 160 aaKnown RBP20.98■□□□□ 0.95
VEGFA-232ENST00000640653 ATP6AP1Q15904 470 aa20.98■□□□□ 0.95
VEGFA-232ENST00000640653 KCTD18Q6PI47 426 aaPredicted RBP20.98■□□□□ 0.95
VEGFA-232ENST00000640653 OR1M1Q8NGA1 313 aa20.98■□□□□ 0.95
VEGFA-232ENST00000640653 TEAD3Q99594 435 aa20.98■□□□□ 0.95
VEGFA-232ENST00000640653 MICU1Q9BPX6 476 aa20.98■□□□□ 0.95
VEGFA-232ENST00000640653 KRT84Q9NSB2 600 aa20.98■□□□□ 0.95
VEGFA-232ENST00000640653 CTSZQ9UBR2 303 aa20.98■□□□□ 0.95
VEGFA-232ENST00000640653 RHBDD3Q9Y3P4 386 aa20.98■□□□□ 0.95
VEGFA-232ENST00000640653 GYPAP02724 150 aa20.97■□□□□ 0.95
VEGFA-232ENST00000640653 IGHV4-38-2P0DP08 117 aa20.97■□□□□ 0.95
VEGFA-232ENST00000640653 TEX36Q5VZQ5 186 aa20.97■□□□□ 0.95
VEGFA-232ENST00000640653 WDR86Q86TI4 376 aa20.97■□□□□ 0.95
VEGFA-232ENST00000640653 BCL6BQ8N143 479 aaPredicted RBP20.97■□□□□ 0.95
VEGFA-232ENST00000640653 ZMAT3Q9HA38 289 aaKnown RBP20.97■□□□□ 0.95
VEGFA-232ENST00000640653 MPC1Q9Y5U8 109 aa20.97■□□□□ 0.95
VEGFA-232ENST00000640653 TRAV40A0A0B4J280 105 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 C22orf46C9J442 243 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 G3V2T6 193 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 TNFRSF13BO14836 293 aaPredicted RBP20.96■□□□□ 0.95
VEGFA-232ENST00000640653 FASP25445 335 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 MTNR1AP48039 350 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 DEGS2Q6QHC5 323 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 FAM90A1Q86YD7 464 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 C11orf53Q8IXP5 236 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 GALNT4Q8N4A0 578 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 OR8B12Q8NGG6 310 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 LRRC29Q8WV35 223 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 RTL8AQ9BWD3 113 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 MROQ9BYG7 248 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 TMEM14AQ9Y6G1 99 aa20.96■□□□□ 0.95
VEGFA-232ENST00000640653 IGHV3OR16-10A0A075B7F0 116 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 CCDC182A6NF36 153 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 ACOD1A6NK06 481 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 LIPFP07098 398 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 MRPL3P09001 348 aaKnown RBP20.95■□□□□ 0.94
VEGFA-232ENST00000640653 MUC1P15941 1255 aaPredicted RBP20.95■□□□□ 0.94
VEGFA-232ENST00000640653 EGR1P18146 543 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 HCCSP53701 268 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 FGF12P61328 243 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 BAMBIQ13145 260 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 MICBQ29980 383 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 C1orf146Q5VVC0 180 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 C9orf139Q6ZV77 190 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 ZDHHC13Q8IUH4 622 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 ITPKCQ96DU7 683 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 AP4S1Q9Y587 144 aa20.95■□□□□ 0.94
VEGFA-232ENST00000640653 PRKYO43930 277 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 PLATP00750 562 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 CST4P01036 141 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 PRTN3P24158 256 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 ACKR3P25106 362 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 CSNK2BP67870 215 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 PRDX4Q13162 271 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 WDR82Q6UXN9 313 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 PNLDC1Q8NA58 520 aaKnown RBP20.94■□□□□ 0.94
VEGFA-232ENST00000640653 ASB17Q8WXJ9 295 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 LYZL4Q96KX0 146 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 ZNF48Q96MX3 618 aaPredicted RBP20.94■□□□□ 0.94
VEGFA-232ENST00000640653 TLNRD1Q9H1K6 362 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 PPP1R3EQ9H7J1 279 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 H2AFY2Q9P0M6 372 aaPredicted RBP20.94■□□□□ 0.94
VEGFA-232ENST00000640653 KAAG1Q9UBP8 84 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 ENOPH1Q9UHY7 261 aa20.94■□□□□ 0.94
VEGFA-232ENST00000640653 IGHV3OR15-7A0A075B7D8 119 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 DNAJC9-AS1A6NH13 148 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 TMEM210A6NLX4 147 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 ZNF850A8MQ14 1090 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 CDIPTO14735 213 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 TMPRSS2O15393 492 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 FCGR1AP12314 374 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 CFPP27918 469 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 CFHR2P36980 270 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 C11orf91Q3C1V1 193 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 FAM81AQ8TBF8 368 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 PIGCQ92535 297 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 ITFG2Q969R8 447 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 CNN2Q99439 309 aaKnown RBP20.93■□□□□ 0.94
VEGFA-232ENST00000640653 SMURF1Q9HCE7 757 aa20.93■□□□□ 0.94
VEGFA-232ENST00000640653 A0A0U1RQV5 110 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 TMEM269A0A1B0GVZ9 245 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 PSMD9O00233 223 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 MITFO75030 526 aaPredicted RBP20.92■□□□□ 0.94
VEGFA-232ENST00000640653 ZNF254O75437 659 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 DCTDP32321 178 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 BPIFB3P59826 476 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 POU4F2Q12837 409 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 GPR157Q5UAW9 335 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 SLX4IPQ5VYV7 408 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 KDM4DQ6B0I6 523 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 KCTD8Q6ZWB6 473 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 MEPCEQ7L2J0 689 aaKnown RBP20.92■□□□□ 0.94
VEGFA-232ENST00000640653 ZDHHC23Q8IYP9 409 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 ZNF679Q8IYX0 411 aa20.92■□□□□ 0.94
VEGFA-232ENST00000640653 C3orf56Q8N813 242 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms