RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 H7C2Y5 167 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 NME2P22392 152 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 QRFPP83859 136 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 BRICD5Q6PL45 260 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 OR5AS1Q8N127 324 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 KCNG3Q8TAE7 436 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 C2CD4CQ8TF44 421 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 HDHD3Q9BSH5 251 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-221ENST00000640341 FRYQ5TBA9 3013 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 MASP2O00187 686 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 CELA2AP08217 269 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 DBHP09172 617 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 IL32P24001 234 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 SMAD4Q13485 552 aaKnown RBP12.89□□□□□ -0.35
SCARB2-221ENST00000640341 ANKRD55Q3KP44 614 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 PHF19Q5T6S3 580 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 UQCC2Q9BRT2 126 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 TLNRD1Q9H1K6 362 aa12.89□□□□□ -0.35
SCARB2-221ENST00000640341 A0A1B0GV50 99 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 TMEM218A2RU14 115 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 TMEM14DPA8MWL7 114 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 FCGR2AP12318 317 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 GLB1P16278 677 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 RCC1P18754 421 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-221ENST00000640341 PVALBP20472 110 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-221ENST00000640341 ID4P47928 161 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 CHRFAM7AQ494W8 412 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 THEM4Q5T1C6 240 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 PGAP1Q75T13 922 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 LYPD6Q86Y78 171 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 NOXO1Q8NFA2 376 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 TOMM40LQ969M1 308 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 CDC6Q99741 560 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 RNF126Q9BV68 326 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 UCK1Q9HA47 277 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 ZNF160Q9HCG1 818 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 SLC2A8Q9NY64 477 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 NUP210LQ5VU65 1888 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 AKR1C3P42330 323 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 CDCP2Q5VXM1 449 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 C5orf46Q6UWT4 87 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 C6orf201Q7Z4U5 140 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 HOGA1Q86XE5 327 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 MISPQ8IVT2 679 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 EIF4E3Q8N5X7 224 aaKnown RBP12.88□□□□□ -0.35
SCARB2-221ENST00000640341 PNLDC1Q8NA58 520 aaKnown RBP12.88□□□□□ -0.35
SCARB2-221ENST00000640341 OIT3Q8WWZ8 545 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 TMEM230Q96A57 120 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 URM1Q9BTM9 101 aaKnown RBP12.88□□□□□ -0.35
SCARB2-221ENST00000640341 DEFB126Q9BYW3 111 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 FAM117AQ9C073 453 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 DNTTIP1Q9H147 329 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 OR10A2Q9H208 303 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 FAM221AA4D161 298 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 OR5H15A6NDH6 313 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 ADAM10O14672 748 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 ANGPTL7O43827 346 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 IL2RAP01589 272 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 ADCYAP1P18509 176 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 ESX1Q8N693 406 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 PTX4Q96A99 478 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 ZNF576Q9H609 170 aa12.88□□□□□ -0.35
SCARB2-221ENST00000640341 NCOA6Q14686 2063 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-221ENST00000640341 TEX13DA0A0J9YY54 714 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-221ENST00000640341 NFYBP25208 207 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 KISS1Q15726 138 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 PLPPR5Q32ZL2 321 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 CCDC157Q569K6 752 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 LDLRAD3Q86YD5 345 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 C20orf196Q8IYI0 205 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 DTWD2Q8NBA8 298 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 POC1BQ8TC44 478 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 GNRHR2Q96P88 292 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 ZNF629Q9UEG4 869 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-221ENST00000640341 FLVCR1Q9Y5Y0 555 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 IGKV1-9A0A0C4DH69 117 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 PGA4P0DJD7 388 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 PGA3P0DJD8 388 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 FOSL2P15408 326 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 PDCD1Q15116 288 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 PCK2Q16822 640 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 OGFOD3Q6PK18 319 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 C17orf82Q86X59 251 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-221ENST00000640341 SVBPQ8N300 66 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 RNF141Q8WVD5 230 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 ASB13Q8WXK3 278 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 ARL11Q969Q4 196 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 MYOTQ9UBF9 498 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 LSM5Q9Y4Y9 91 aaKnown RBP12.87□□□□□ -0.35
SCARB2-221ENST00000640341 MED19A0JLT2 244 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-221ENST00000640341 BCAT2O15382 392 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-221ENST00000640341 CHRM2P08172 466 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 OPRM1P35372 400 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 SCRN3Q0VDG4 424 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 ZP4Q12836 540 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 RBM39Q14498 530 aaKnown RBP12.87□□□□□ -0.35
SCARB2-221ENST00000640341 RAET1LQ5VY80 246 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 RPL7L1Q6DKI1 246 aaKnown RBP12.87□□□□□ -0.35
SCARB2-221ENST00000640341 OR56B1Q8NGI3 324 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 OR13G1Q8NGZ3 307 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms