RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 OR1M1Q8NGA1 313 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 OR52H1Q8NGJ2 320 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 LRRC29Q8WV35 223 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 LRTOMTQ8WZ04 291 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 PPP1R14AQ96A00 147 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 C1orf147Q96MC9 270 aaPredicted RBP14.74□□□□□ -0.05
PNKP-230ENST00000638016 TECTBQ96PL2 329 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 TEAD3Q99594 435 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 NUDT16L1Q9BRJ7 211 aaKnown RBP14.74□□□□□ -0.05
PNKP-230ENST00000638016 LAMP5Q9UJQ1 280 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.73□□□□□ -0.05
PNKP-230ENST00000638016 MDFIC2A0A1B0GVS7 189 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 OOEPA6NGQ2 149 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 ADAM20O43506 726 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 GMFBP60983 142 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 TUSC1Q2TAM9 212 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 BTNL3Q6UXE8 466 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 RHOUQ7L0Q8 258 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 KRT77Q7Z794 578 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 TAF15Q92804 592 aaKnown RBP eCLIP14.73□□□□□ -0.05
PNKP-230ENST00000638016 ITPKCQ96DU7 683 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 SEMA6AQ9H2E6 1030 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 KRT84Q9NSB2 600 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 C14orf119Q9NWQ9 140 aa14.73□□□□□ -0.05
PNKP-230ENST00000638016 ZNF850A8MQ14 1090 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 G3V2T6 193 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.72□□□□□ -0.05
PNKP-230ENST00000638016 HAX1O00165 279 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 PHYHO14832 338 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 LHBP01229 141 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 APOC1P02654 83 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 TFF1P04155 84 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 POLR2IP36954 125 aaKnown RBP14.72□□□□□ -0.05
PNKP-230ENST00000638016 FGF12P61328 243 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 UBA52P62987 128 aaKnown RBP14.72□□□□□ -0.05
PNKP-230ENST00000638016 MFGE8Q08431 387 aaPredicted RBP14.72□□□□□ -0.05
PNKP-230ENST00000638016 PRDX4Q13162 271 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 SLX4IPQ5VYV7 408 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 WDR82Q6UXN9 313 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 PLEKHG7Q6ZR37 379 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 TCEANCQ8N8B7 351 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 SPERTQ8NA61 448 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 PLPP7Q8NBV4 271 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 HPSE2Q8WWQ2 592 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 DNAJC9Q8WXX5 260 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 UPRTQ96BW1 309 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 FAM206AQ9NX38 181 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 AP4S1Q9Y587 144 aa14.72□□□□□ -0.05
PNKP-230ENST00000638016 KIR2DS1A0A191URI9 304 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 ZAR1LA6NP61 321 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 TRIM77I1YAP6 450 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 SFTPBP07988 381 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 FPR2P25090 351 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 FASP25445 335 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 C12orf73Q69YU5 71 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 KDM4DQ6B0I6 523 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 C12orf54Q6X4T0 127 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 BRD3OSQ6XYD6 125 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 FAM216AQ8WUB2 273 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 ZFAND2BQ8WV99 257 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 PIGCQ92535 297 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 RPL3LQ92901 407 aaKnown RBP14.71□□□□□ -0.05
PNKP-230ENST00000638016 IL4I1Q96RQ9 567 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 CIB1Q99828 191 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 TEX12Q9BXU0 123 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 YIPF3Q9GZM5 350 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 GABARAPL1Q9H0R8 117 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 SP140LQ9H930 580 aa14.71□□□□□ -0.05
PNKP-230ENST00000638016 TRAV38-1A0A0B4J264 116 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 DNAJC9-AS1A6NH13 148 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 CDIPTO14735 213 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 PLATP00750 562 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 SELLP14151 372 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 AMY2BP19961 511 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 CFL1P23528 166 aaKnown RBP14.7□□□□□ -0.06
PNKP-230ENST00000638016 GNALP38405 381 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 ESRRGP62508 458 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 EFNB1P98172 346 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 LCN1P1Q5VSP4 162 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 AADACL4Q5VUY2 407 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 TEX36Q5VZQ5 186 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 RUSC1-AS1Q66K80 236 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 OR8B4Q96RC9 309 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 CCL13Q99616 98 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 PKP2Q99959 881 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 MS4A7Q9GZW8 240 aaPredicted RBP14.7□□□□□ -0.06
PNKP-230ENST00000638016 WDR13Q9H1Z4 485 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 RGCCQ9H4X1 137 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 NIPAL2Q9H841 368 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 ADGRL4Q9HBW9 690 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 ERVK-18Q9QC07 812 aa14.7□□□□□ -0.06
PNKP-230ENST00000638016 TMEM269A0A1B0GVZ9 245 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 SAC3D1A6NKF1 404 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 DVL1O14640 695 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 APOL3O95236 402 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 CPT2P23786 658 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 RASSF2P50749 326 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 WDR38Q5JTN6 314 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 MEPCEQ7L2J0 689 aaKnown RBP14.69□□□□□ -0.06
PNKP-230ENST00000638016 DOK3Q7L591 496 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms