RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TMEM236Q5W0B7 351 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 BCL6BQ8N143 479 aaPredicted RBP15.78■□□□□ 0.12
CLN6-221ENST00000637494 GCSAMQ8N6F7 178 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 OR1M1Q8NGA1 313 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 LRRC29Q8WV35 223 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 HIST1H2AAQ96QV6 131 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 YIPF3Q9GZM5 350 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 FAM53CQ9NYF3 392 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 TMEM14AQ9Y6G1 99 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 DNAJC9-AS1A6NH13 148 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 GSC2O15499 205 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 IGHV4-38-2P0DP08 117 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 MUC1P15941 1255 aaPredicted RBP15.77■□□□□ 0.12
CLN6-221ENST00000637494 PSMA6P60900 246 aaKnown RBP15.77■□□□□ 0.12
CLN6-221ENST00000637494 ESRRGP62508 458 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 FOXL1Q12952 345 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 C11orf91Q3C1V1 193 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 TEX36Q5VZQ5 186 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 C9orf139Q6ZV77 190 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 BBS1Q8NFJ9 593 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 OR5K1Q8NHB7 308 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 FAM81AQ8TBF8 368 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 DACT3Q96B18 629 aaPredicted RBP15.77■□□□□ 0.12
CLN6-221ENST00000637494 PCGF1Q9BSM1 259 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 MROQ9BYG7 248 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 H2AFY2Q9P0M6 372 aaPredicted RBP15.77■□□□□ 0.12
CLN6-221ENST00000637494 CTSZQ9UBR2 303 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 RHBDD3Q9Y3P4 386 aa15.77■□□□□ 0.12
CLN6-221ENST00000637494 TMEM210A6NLX4 147 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 P2RY10O00398 339 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 TMPRSS2O15393 492 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 ATP5HO75947 161 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 ECDO95905 644 aaPredicted RBP15.76■□□□□ 0.11
CLN6-221ENST00000637494 PLATP00750 562 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 LHBP01229 141 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 METTL11BQ5VVY1 283 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 DEGS2Q6QHC5 323 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 KCTD8Q6ZWB6 473 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 SLC36A1Q7Z2H8 476 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 FAM90A1Q86YD7 464 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 GALNT4Q8N4A0 578 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 ASB17Q8WXJ9 295 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 ITFG2Q969R8 447 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 ZDHHC16Q969W1 377 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 TEAD3Q99594 435 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 CADM1Q9BY67 442 aaKnown RBP15.76■□□□□ 0.11
CLN6-221ENST00000637494 KRT84Q9NSB2 600 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 ZNF319Q9P2F9 582 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 ENOPH1Q9UHY7 261 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 LRP12Q9Y561 859 aa15.76■□□□□ 0.11
CLN6-221ENST00000637494 IGHV3OR15-7A0A075B7D8 119 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 ACOD1A6NK06 481 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 ZNF879B4DU55 563 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 C22orf46C9J442 243 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 DVL1O14640 695 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 TOX4O94842 621 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 HKR1P10072 659 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 ALOX5APP20292 161 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 SLC2A5P22732 501 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 MAP2K3P46734 347 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 HOXA4Q00056 320 aaPredicted RBP15.75■□□□□ 0.11
CLN6-221ENST00000637494 BNIP1Q12981 228 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 PRDX4Q13162 271 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 FAHD1Q6P587 224 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 COMMD2Q86X83 199 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 ST8SIA4Q92187 359 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 PIGCQ92535 297 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 DUX5Q96PT3 197 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 KAAG1Q9UBP8 84 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 DNAJB11Q9UBS4 358 aa15.75■□□□□ 0.11
CLN6-221ENST00000637494 ZNF850A8MQ14 1090 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 G3V2T6 193 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 CDIPTO14735 213 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 ZNF254O75437 659 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 CST4P01036 141 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 MRPL3P09001 348 aaKnown RBP15.74■□□□□ 0.11
CLN6-221ENST00000637494 FASP25445 335 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 ACTR3P61158 418 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 CSNK2BP67870 215 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 PTGES3Q15185 160 aaKnown RBP15.74■□□□□ 0.11
CLN6-221ENST00000637494 TUSC1Q2TAM9 212 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 ZNF829Q3KNS6 432 aaPredicted RBP15.74■□□□□ 0.11
CLN6-221ENST00000637494 AWAT1Q58HT5 328 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 WDR82Q6UXN9 313 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 BTN2A1Q7KYR7 527 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 ZDHHC23Q8IYP9 409 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 OR8B12Q8NGG6 310 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 UTP4Q969X6 686 aaKnown RBP15.74■□□□□ 0.11
CLN6-221ENST00000637494 C12orf43Q96C57 262 aaKnown RBP15.74■□□□□ 0.11
CLN6-221ENST00000637494 ITPKCQ96DU7 683 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 RNF170Q96K19 258 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 ZNF48Q96MX3 618 aaPredicted RBP15.74■□□□□ 0.11
CLN6-221ENST00000637494 RASSF4Q9H2L5 321 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 IKZF2Q9UKS7 526 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 KLHDC2Q9Y2U9 406 aa15.74■□□□□ 0.11
CLN6-221ENST00000637494 TMEM269A0A1B0GVZ9 245 aa15.73■□□□□ 0.11
CLN6-221ENST00000637494 CLDN34H7C241 214 aa15.73■□□□□ 0.11
CLN6-221ENST00000637494 TNFRSF13BO14836 293 aaPredicted RBP15.73■□□□□ 0.11
CLN6-221ENST00000637494 NDUFB3O43676 98 aa15.73■□□□□ 0.11
CLN6-221ENST00000637494 RNASE1P07998 156 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms