RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 CCDC86Q9H6F5 360 aaKnown RBP4.03□□□□□ -1.76
SCN1A-210ENST00000635776 ZNF175Q9Y473 711 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 COL4A3Q01955 1670 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 C13orf42A0A1B0GVH6 325 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 TMEM14DPA8MWL7 114 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 TOXO94900 526 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 VSIG8P0DPA2 414 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 RPS27P42677 84 aaKnown RBP4.03□□□□□ -1.76
SCN1A-210ENST00000635776 RAD52P43351 418 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 VAMP2P63027 116 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 ARG2P78540 354 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 ZNF260Q3ZCT1 412 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 PLCXD3Q63HM9 321 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 TMEM185AQ8NFB2 350 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 AQP3Q92482 292 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 SLAMF9Q96A28 289 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 PIGMQ9H3S5 423 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 RBM7Q9Y580 266 aaKnown RBP4.03□□□□□ -1.76
SCN1A-210ENST00000635776 RNF212BA8MTL3 300 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 M0R296 226 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 ADRA2CP18825 462 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 CD96P40200 585 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 SELENOVP59797 346 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 OR8B12Q8NGG6 310 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 MITD1Q8WV92 249 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 RNF141Q8WVD5 230 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 ARL11Q969Q4 196 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 SLC25A31Q9H0C2 315 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 CNTD2Q9H8S5 307 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 KCNIP1Q9NZI2 227 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 SPEF1Q9Y4P9 236 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 DENND4AQ7Z401 1863 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 C2orf72A6NCS6 295 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 TMEM235A6NFC5 223 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 OR5B21A6NL26 309 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 ZNF724A8MTY0 619 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 MCRIP1C9JLW8 97 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 NRASP01111 189 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 ZNF35P13682 527 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 HLA-GP17693 338 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 PSMB6P28072 239 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 SLC10A1Q14973 349 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 HOGA1Q86XE5 327 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 ZNF573Q86YE8 665 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 POFUT1Q9H488 388 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 TMEM38BQ9NVV0 291 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 B8ZZF3 427 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 GPR137BO60478 399 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 SERPINA2P20848 420 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 NKPD1Q17RQ9 610 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 UQCC3Q6UW78 93 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 MOB3CQ70IA8 216 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 CD163Q86VB7 1156 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 COMMD7Q86VX2 200 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 SAXO1Q8IYX7 474 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 OR5AP2Q8NGF4 316 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 CT55Q8WUE5 264 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 CLCC1Q96S66 551 aa4.03□□□□□ -1.76
SCN1A-210ENST00000635776 USB1Q9BQ65 265 aaKnown RBP4.03□□□□□ -1.76
SCN1A-210ENST00000635776 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.03□□□□□ -1.76
SCN1A-210ENST00000635776 A0A0B4J203 849 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 PYCARD-AS1I3L0S3 204 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 PRKNO60260 465 aaPredicted RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 OR10D3Q8NH80 312 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 POC1BQ8TC44 478 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 RNF170Q96K19 258 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 FOXN4Q96NZ1 517 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 OCSTAMPQ9BR26 566 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 SLC6A15Q9H2J7 730 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 C12orf4Q9NQ89 552 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 OPN4Q9UHM6 478 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 ING1Q9UK53 422 aaPredicted RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 TRAV17A0A0B4J275 112 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 SFT2D2O95562 160 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF728P0DKX0 622 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 CD37P11049 281 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 ANXA7P20073 488 aaKnown RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 SNRPD2P62316 118 aaKnown RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 SORDQ00796 357 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 IKZF1Q13422 519 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 ETFDHQ16134 617 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 MPV17LQ2QL34 196 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 CORO6Q6QEF8 472 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 LYPD8Q6UX82 237 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 DNM1P46Q6ZS02 220 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 HSD17B13Q7Z5P4 300 aaPredicted RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 NR2C2APQ86WQ0 139 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 OSR2Q8N2R0 312 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 RTL8AQ9BWD3 113 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 COLQQ9Y215 455 aaPredicted RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 FAM230AA0A1W2PPH8 454 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 RER1O15258 196 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 GMDSO60547 372 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 PNPP00491 289 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 PDGFAP04085 211 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 CTSDP07339 412 aaPredicted RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 HLA-DOBP13765 273 aa4.02□□□□□ -1.77
SCN1A-210ENST00000635776 MDH2P40926 338 aaKnown RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 SNU13P55769 128 aaKnown RBP4.02□□□□□ -1.77
SCN1A-210ENST00000635776 SEC16AO15027 2179 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms