RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 LOC390937A0A1W2PQ73 354 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 SYT7O43581 403 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 DHRS3O75911 302 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 IGLV3-1P01715 115 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 IGHV1-46P01743 117 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 GNALP38405 381 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 EFNA4P52798 201 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 TAS2R43P59537 309 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 OR8G1Q15617 311 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 FAM209AQ5JX71 171 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 TMEM244Q5VVB8 128 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 RNLSQ5VYX0 342 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 Q6ZR03 302 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 PRSS48Q7RTY5 328 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 NANOGP1Q8N7R0 232 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 SEMA6DQ8NFY4 1073 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 OR10AD1Q8NGE0 317 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 NEU4Q8WWR8 484 aaPredicted RBP12.51□□□□□ -0.41
PNKP-221ENST00000627317 ITFG2Q969R8 447 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 SOX7Q9BT81 388 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 ADAT1Q9BUB4 502 aaKnown RBP12.51□□□□□ -0.41
PNKP-221ENST00000627317 PAPOLGQ9BWT3 736 aaKnown RBP12.51□□□□□ -0.41
PNKP-221ENST00000627317 EGLN1Q9GZT9 426 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 SLC22A4Q9H015 551 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 COMMD4Q9H0A8 199 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 PLEKHA1Q9HB21 404 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 DECR2Q9NUI1 292 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 BABAM2Q9NXR7 383 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 NKIRAS2Q9NYR9 191 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 MRPL15Q9P015 296 aaKnown RBP12.51□□□□□ -0.41
PNKP-221ENST00000627317 LRRC42Q9Y546 428 aa12.51□□□□□ -0.41
PNKP-221ENST00000627317 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.5□□□□□ -0.41
PNKP-221ENST00000627317 TRBV2A0A0J9YWF9 115 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 A0A1B0GTI1 187 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 TMEM212A6NML5 194 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 OR4C45A6NMZ5 311 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 H3BSH0 61 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 SMAD7O15105 426 aaKnown RBP12.5□□□□□ -0.41
PNKP-221ENST00000627317 ADH4P08319 380 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 ACHEP22303 614 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 CCL1P22362 96 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 CA6P23280 308 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 ACKR3P25106 362 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 MAGEB1P43366 347 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 GTF2A1P52655 376 aaPredicted RBP12.5□□□□□ -0.41
PNKP-221ENST00000627317 CCL8P80075 99 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 TNFAIP6P98066 277 aaPredicted RBP12.5□□□□□ -0.41
PNKP-221ENST00000627317 RIPPLY1Q0D2K3 151 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 CDK5R1Q15078 307 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 CCDC58Q4VC31 144 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 RPL22L1Q6P5R6 122 aaKnown RBP12.5□□□□□ -0.41
PNKP-221ENST00000627317 Q71RC1 249 aaPredicted RBP12.5□□□□□ -0.41
PNKP-221ENST00000627317 CCDC54Q8NEL0 328 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 SAP30LQ9HAJ7 183 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 PIGLQ9Y2B2 252 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 LRCH1Q9Y2L9 728 aa12.5□□□□□ -0.41
PNKP-221ENST00000627317 IGHV4-30-2A0A087WSY4 118 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 ZNF816-ZNF321PA0A0X1KG74 233 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 DHRS7CA6NNS2 312 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 RNF223E7ERA6 249 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 NCR1O76036 304 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 LY6HO94772 140 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 F12P00748 615 aaPredicted RBP12.49□□□□□ -0.41
PNKP-221ENST00000627317 HLA-DPB1P04440 258 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 ISG15P05161 165 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 RPSAP08865 295 aaKnown RBP12.49□□□□□ -0.41
PNKP-221ENST00000627317 FAHP16930 419 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 ZNF12P17014 697 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 IRF3Q14653 427 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 KRTAP21-3Q3LHN1 58 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 ZBTB37Q5TC79 503 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 XAF1Q6GPH4 301 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 RDH10Q8IZV5 341 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 ZFP41Q8N8Y5 198 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 PLPP7Q8NBV4 271 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 ZNF485Q8NCK3 441 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 OR5AK2Q8NH90 309 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 PDCD1LG2Q9BQ51 273 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 REG4Q9BYZ8 158 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 ABCB9Q9NP78 766 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 ENPP5Q9UJA9 477 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 HHLA2Q9UM44 414 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 RHBDD3Q9Y3P4 386 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 V9GYS6 101 aa12.49□□□□□ -0.41
PNKP-221ENST00000627317 PNMA8CA0A1B0GUJ8 204 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 ANXA2P2A6NMY6 339 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 MLNRO43193 412 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 SSX4O60224 188 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 GMDSO60547 372 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 MRPS14O60783 128 aaKnown RBP12.48□□□□□ -0.41
PNKP-221ENST00000627317 ZFPL1O95159 310 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 LALBAP00709 142 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 CST4P01036 141 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 HPXP02790 462 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 CD55P08174 381 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 DAOP14920 347 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 SRP9P49458 86 aaKnown RBP12.48□□□□□ -0.41
PNKP-221ENST00000627317 SLC3A1Q07837 685 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 MZT1Q08AG7 82 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 PRDX4Q13162 271 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms