RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 HCCSP53701 268 aa18.69■□□□□ 0.58
SF1-220ENST00000626028 CDC42P60953 191 aa18.69■□□□□ 0.58
SF1-220ENST00000626028 GNB2P62879 340 aa18.69■□□□□ 0.58
SF1-220ENST00000626028 ZNF154Q13106 437 aa18.69■□□□□ 0.58
SF1-220ENST00000626028 HNRNPA0Q13151 305 aaKnown RBP18.69■□□□□ 0.58
SF1-220ENST00000626028 GFOD2Q3B7J2 385 aa18.69■□□□□ 0.58
SF1-220ENST00000626028 C11orf91Q3C1V1 193 aa18.69■□□□□ 0.58
SF1-220ENST00000626028 USP43Q70EL4 1123 aa18.69■□□□□ 0.58
SF1-220ENST00000626028 ZNF771Q7L3S4 317 aaPredicted RBP18.69■□□□□ 0.58
SF1-220ENST00000626028 RAB3IPQ96QF0 476 aaPredicted RBP18.69■□□□□ 0.58
SF1-220ENST00000626028 IL4I1Q96RQ9 567 aa18.69■□□□□ 0.58
SF1-220ENST00000626028 MICU1Q9BPX6 476 aa18.69■□□□□ 0.58
SF1-220ENST00000626028 INSIG2Q9Y5U4 225 aa18.69■□□□□ 0.58
SF1-220ENST00000626028 LOC105371242A0A075B767 164 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 A6NLC8 198 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 ZNF670-ZNF695F2Z2N8 137 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 TRAPPC2LH3BP13 241 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 FSHBP01225 129 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 GRPP07492 148 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 HTR1FP30939 366 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 MAP2K3P46734 347 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 SEC61A1P61619 476 aaKnown RBP18.68■□□□□ 0.58
SF1-220ENST00000626028 ZBTB37Q5TC79 503 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 ZNF322Q6U7Q0 402 aaPredicted RBP18.68■□□□□ 0.58
SF1-220ENST00000626028 SLC35F2Q8IXU6 374 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 ITPKCQ96DU7 683 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 PKP2Q99959 881 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 RTL8AQ9BWD3 113 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 TLNRD1Q9H1K6 362 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 MMP26Q9NRE1 261 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 C1orf123Q9NWV4 160 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 NUFIP1Q9UHK0 495 aaKnown RBP18.68■□□□□ 0.58
SF1-220ENST00000626028 OPN4Q9UHM6 478 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 COPS3Q9UNS2 423 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 RHBDD3Q9Y3P4 386 aa18.68■□□□□ 0.58
SF1-220ENST00000626028 STAB1Q9NY15 2570 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 OOEPA6NGQ2 149 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 SAC3D1A6NKF1 404 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 TMEM210A6NLX4 147 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 ZNF205O95201 554 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 IGLV3-1P01715 115 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 ADRA2CP18825 462 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 EPHA1P21709 976 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 POLR2IP36954 125 aaKnown RBP18.67■□□□□ 0.58
SF1-220ENST00000626028 RBMXP38159 391 aaKnown RBP18.67■□□□□ 0.58
SF1-220ENST00000626028 PITPNBP48739 271 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 CXCR4P61073 352 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 PAX2Q02962 417 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 DEFB108BQ8NET1 73 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 OR1M1Q8NGA1 313 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 ZNF418Q8TF45 676 aaPredicted RBP18.67■□□□□ 0.58
SF1-220ENST00000626028 ZFAND2BQ8WV99 257 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 DVL3Q92997 716 aaPredicted RBP18.67■□□□□ 0.58
SF1-220ENST00000626028 HRASLS5Q96KN8 279 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 LYZL4Q96KX0 146 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 MRI1Q9BV20 369 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 RIBC2Q9H4K1 309 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 CLN8Q9UBY8 286 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 AUP1Q9Y679 476 aa18.67■□□□□ 0.58
SF1-220ENST00000626028 ZNF816-ZNF321PA0A0X1KG74 233 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 M0R129 80 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 MTRF1O75570 445 aaKnown RBP18.66■□□□□ 0.58
SF1-220ENST00000626028 OR2T7P0C7T2 308 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 MUC1P15941 1255 aaPredicted RBP18.66■□□□□ 0.58
SF1-220ENST00000626028 ACKR3P25106 362 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 ALDH3A2P51648 485 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 PAX8Q06710 450 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 FAM76BQ5HYJ3 339 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 SLC25A30Q5SVS4 291 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 FAM201AQ5SY85 155 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 TEX36Q5VZQ5 186 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 BTNL3Q6UXE8 466 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 BCDIN3DQ7Z5W3 292 aaKnown RBP18.66■□□□□ 0.58
SF1-220ENST00000626028 GCSAMQ8N6F7 178 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 OR2T27Q8NH04 317 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 FAM81AQ8TBF8 368 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 PBOV1Q9GZY1 135 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 OCEL1Q9H607 264 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 IKZF2Q9UKS7 526 aa18.66■□□□□ 0.58
SF1-220ENST00000626028 hCG_1807616A0A1W2PRN6 198 aa18.65■□□□□ 0.58
SF1-220ENST00000626028 TNFRSF13BO14836 293 aaPredicted RBP18.65■□□□□ 0.58
SF1-220ENST00000626028 PRDX4Q13162 271 aa18.65■□□□□ 0.58
SF1-220ENST00000626028 CD276Q5ZPR3 534 aa18.65■□□□□ 0.58
SF1-220ENST00000626028 C11orf53Q8IXP5 236 aa18.65■□□□□ 0.58
SF1-220ENST00000626028 RAB40AQ8WXH6 277 aa18.65■□□□□ 0.58
SF1-220ENST00000626028 OR5P3Q8WZ94 311 aa18.65■□□□□ 0.58
SF1-220ENST00000626028 DACT3Q96B18 629 aaPredicted RBP18.65■□□□□ 0.58
SF1-220ENST00000626028 C12orf43Q96C57 262 aaKnown RBP18.65■□□□□ 0.58
SF1-220ENST00000626028 JMJD8Q96S16 334 aa18.65■□□□□ 0.58
SF1-220ENST00000626028 IMPAD1Q9NX62 359 aa18.65■□□□□ 0.58
SF1-220ENST00000626028 KAAG1Q9UBP8 84 aa18.65■□□□□ 0.58
SF1-220ENST00000626028 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.65■□□□□ 0.58
SF1-220ENST00000626028 IGHV2-70DA0A0C4DH43 119 aa18.64■□□□□ 0.57
SF1-220ENST00000626028 KIR2DS1A0A191URI9 304 aa18.64■□□□□ 0.57
SF1-220ENST00000626028 DHRS7CA6NNS2 312 aa18.64■□□□□ 0.57
SF1-220ENST00000626028 PRR32B1ATL7 298 aa18.64■□□□□ 0.57
SF1-220ENST00000626028 PSMD9O00233 223 aa18.64■□□□□ 0.57
SF1-220ENST00000626028 EI24O14681 340 aa18.64■□□□□ 0.57
SF1-220ENST00000626028 SRSF10O75494 262 aaKnown RBP18.64■□□□□ 0.57
SF1-220ENST00000626028 SULT1C4O75897 302 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms