RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 REEP6Q96HR9 211 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 PGAM5Q96HS1 289 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 ADAT1Q9BUB4 502 aaKnown RBP5.38□□□□□ -1.55
TCF4-249ENST00000625716 ABHD6Q9BV23 337 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 METTL17Q9H7H0 456 aaPredicted RBP5.38□□□□□ -1.55
TCF4-249ENST00000625716 NIPAL2Q9H841 368 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 MARCH7Q9H992 704 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 FN3KRPQ9HA64 309 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 NTN4Q9HB63 628 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 PATZ1Q9HBE1 687 aaKnown RBP5.38□□□□□ -1.55
TCF4-249ENST00000625716 SLC25A19Q9HC21 320 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 UFSP2Q9NUQ7 469 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 DNAJC27Q9NZQ0 273 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 MRPL15Q9P015 296 aaKnown RBP5.38□□□□□ -1.55
TCF4-249ENST00000625716 PPIAL4AQ9Y536 164 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 ORC6Q9Y5N6 252 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 CSPG4Q6UVK1 2322 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 NF1P21359 2839 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 FN1P02751 2386 aaKnown RBP5.37□□□□□ -1.55
TCF4-249ENST00000625716 CHD3Q12873 2000 aaKnown RBP5.37□□□□□ -1.55
TCF4-249ENST00000625716 ZFHX3Q15911 3703 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 MLNRO43193 412 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 TCF21O43680 179 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 SELENOFO60613 162 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 CYB5R3P00387 301 aaPredicted RBP5.37□□□□□ -1.55
TCF4-249ENST00000625716 GRPP07492 148 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 PSKH1P11801 424 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 RPS2P15880 293 aaKnown RBP5.37□□□□□ -1.55
TCF4-249ENST00000625716 CPT2P23786 658 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 CD200P41217 278 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 ZNF121P58317 390 aaPredicted RBP5.37□□□□□ -1.55
TCF4-249ENST00000625716 ZMYND11Q15326 602 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 KCNJ8Q15842 424 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 ZNF181Q2M3W8 571 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 FAHD1Q6P587 224 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 SLC16A9Q7RTY1 509 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 AMIGO2Q86SJ2 522 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 TIGD4Q8IY51 512 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 RFLNBQ8N5W9 214 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 BOLLQ8N9W6 283 aaKnown RBP5.37□□□□□ -1.55
TCF4-249ENST00000625716 CSNK2A3Q8NEV1 391 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 OR8B3Q8NGG8 313 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 OR56B2PQ8NGI1 322 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 NANPQ8TBE9 248 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 ASB17Q8WXJ9 295 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 LRTOMTQ8WZ04 291 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 SGK3Q96BR1 496 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 HIST1H2AAQ96QV6 131 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 OR8B2Q96RD0 313 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 TEAD3Q99594 435 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 MROQ9BYG7 248 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 YIPF3Q9GZM5 350 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 SEMA6AQ9H2E6 1030 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 RGCCQ9H4X1 137 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 TRIM36Q9NQ86 728 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 DCAF16Q9NXF7 216 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 RNF7Q9UBF6 113 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 MIOXQ9UGB7 285 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 OR5V1Q9UGF6 321 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 LRCH1Q9Y2L9 728 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 SF3B6Q9Y3B4 125 aaKnown RBP5.37□□□□□ -1.55
TCF4-249ENST00000625716 TMEM14AQ9Y6G1 99 aa5.37□□□□□ -1.55
TCF4-249ENST00000625716 ABCA1O95477 2261 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 A0A1B0GWJ7 208 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 hCG_1807616A0A1W2PRN6 198 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 A6NLC8 198 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 ANXA2P2A6NMY6 339 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 EBAG9O00559 213 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 PHYHO14832 338 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 PRKYO43930 277 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 MITFO75030 526 aaPredicted RBP5.36□□□□□ -1.55
TCF4-249ENST00000625716 FAM20BO75063 409 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 MRPL3P09001 348 aaKnown RBP5.36□□□□□ -1.55
TCF4-249ENST00000625716 FPR2P25090 351 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 ATP6V1E1P36543 226 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 OPRL1P41146 370 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 GNB2P62879 340 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 FAM3AP98173 230 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 MAB21L1Q13394 359 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 OR8B8Q15620 311 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 PRAMEF6Q5VXH4 476 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 KDM4DQ6B0I6 523 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 BTNL3Q6UXE8 466 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 LRRN1Q6UXK5 716 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 MEPCEQ7L2J0 689 aaKnown RBP5.36□□□□□ -1.55
TCF4-249ENST00000625716 COMMD2Q86X83 199 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 TCEANCQ8N8B7 351 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 DEFB108BQ8NET1 73 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 BBS1Q8NFJ9 593 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 SPATA3Q8NHX4 192 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 FAM81AQ8TBF8 368 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 TMEM163Q8TC26 289 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 Q8TCH9 128 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 ZNF418Q8TF45 676 aaPredicted RBP5.36□□□□□ -1.55
TCF4-249ENST00000625716 SPSB4Q96A44 273 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 NEIL1Q96FI4 390 aaPredicted RBP5.36□□□□□ -1.55
TCF4-249ENST00000625716 DUS3LQ96G46 650 aaKnown RBP5.36□□□□□ -1.55
TCF4-249ENST00000625716 CENPNQ96H22 339 aaPredicted RBP5.36□□□□□ -1.55
TCF4-249ENST00000625716 SIGLEC11Q96RL6 698 aa5.36□□□□□ -1.55
TCF4-249ENST00000625716 AMELYQ99218 206 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms